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BaseInfo

ncRNA ID novel_bna_miR339
Species Brassica napus
Class miRNA
Genome position ChrC4:50806218-50806315 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR527236
Length 24
Mature sequence(if miRNA) 75 - AGCGGAAUAUAAGAAAAUGUCUCU - 98
Stem-loop(if miRNA) --  C             A          C      U        C  A
  AG GGAAUAUAAGAAA UGUCUCUUAA UUUUAA UAAAAAAA UA A
  || ||||||||||||| |||||||||| |||||| |||||||| ||
  UC CCUUAUAUUCUUU GCAGAGAAUU AAAAUU AUUUUUUU AU A
AA  A             A          A      C        A  A
Stem-loop sequence AGCGGAAUAUAAGAAAAUGUCUCUUAACUUUUAAUUAAAAAAACUAAAAAUAAUUUUUUUACUUAAAAAUUAAGAGACGAUUUCUUAUAUUCCACUAA