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BaseInfo

ncRNA ID novel_bna_miR337
Species Brassica napus
Class miRNA
Genome position ChrC4:60672265-60672341 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR527236;SRR1363495;SRR1363496;SRR2015555
Length 21
Mature sequence(if miRNA) 57 - UGGAGAAGCAGAGCACGUGCA - 77
Stem-loop(if miRNA) --     A  CA             C  --AA     U A
  UGGAG AG  GAGCACGUGCAAA CA    AAACA G A
  ||||| ||  ||||||||||||| ||    ||||| |
  ACCUC UC  CUCGUGCACGUUU GU    UUUGU C A
CA     C  CC             C  AUAC     - U
Stem-loop sequence UGGAGAAGCAGAGCACGUGCAAACCAAAAAACAUGAAAUCUGUUUCAUAUGCUUUGCACGUGCUCCCCUCCUCCAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013822801.1
ncRNA:21   ACGUGCACGAGACGAAGAGGU   1
  |*=||||||*|||||||||||
targets:819   UUUACGUGCCCUGCUUCUCCA   839

2.5 PREDICTED: Brassica napus NAC domain-containing protein 100-like (LOC106382745), mRNA NAC domain-containing protein 100-like(LOC106382745) coding protein psRNATarget
XM_013885712.1
ncRNA:21   ACGUGCACGAGACGAAGAGGU   1
  |*=||||||*|||||||||||
targets:819   UUUACGUGCCCUGCUUCUCCA   839

2.5 PREDICTED: Brassica napus NAC domain-containing protein 100-like (LOC106444178), mRNA NAC domain-containing protein 100-like(LOC106444178) coding protein psRNATarget
XM_013868801.1
ncRNA:21   ACGUGCACGAGACGAAGAGGU   1
  |*=||||||*|||||||||||
targets:827   UUUACGUGCCCUGCUUCUCCA   847

2.5 PREDICTED: Brassica napus NAC domain-containing protein 100 (LOC106428056), mRNA NAC domain-containing protein 100(LOC106428056) coding protein psRNATarget
XM_013881471.1
ncRNA:21   ACGUGCACGAGACGAAGAGGU   1
  |*=||||||*|||||||||||
targets:780   UUUACGUGCCCUGCUUCUCCA   800

2.5 PREDICTED: Brassica napus NAC domain-containing protein 100-like (LOC106439922), mRNA NAC domain-containing protein 100-like(LOC106439922) coding protein psRNATarget
KC966745.1
ncRNA:21   ACGUGCACGAGACGAAGAGGU   1
  |*=||||||*|||||||||||
targets:810   UUUACGUGCCCUGCUUCUCCA   830

2.5 Brassica napus NAC transcription factor 100 (NAC100.1) mRNA, complete cds NA coding protein psRNATarget
XM_013860292.1
ncRNA:21   ACGUGCACGAGACGAAGAGGU   1
  |*=||||||*|||||||||||
targets:753   UUUACGUGCCCUGCUUCUCCA   773

2.5 PREDICTED: Brassica napus NAC domain-containing protein 100-like (LOC106419492), mRNA NAC domain-containing protein 100-like(LOC106419492) coding protein psRNATarget
XM_013891314.1
ncRNA:21   ACGUGCACGAGACGAAGAGGU   1
  |*=||||||*|||||||||||
targets:745   UUUACGUGCCCUGCUUCUCCA   765

2.5 PREDICTED: Brassica napus NAC domain-containing protein 100-like (LOC106449576), mRNA NAC domain-containing protein 100-like(LOC106449576) coding protein psRNATarget
XM_013819156.1
ncRNA:21   ACGUGCACGAGACGAAGAGGU   1
  **=||||||*|||||||||||
targets:756   CUUACGUGCCCUGCUUCUCCA   776

2.5 PREDICTED: Brassica napus NAC domain-containing protein 100-like (LOC106379142), mRNA NAC domain-containing protein 100-like(LOC106379142) coding protein psRNATarget
KC966757.1
ncRNA:21   ACGUGCACGAGACGAAGAGGU   1
  **=||||||*|||||||||||
targets:623   CUUACGUGCCCUGCUUCUCCA   643

2.5 Brassica napus NAC transcription factor 79 (NAC79.1) mRNA, complete cds NA coding protein psRNATarget
NM_001316090.1
ncRNA:21   ACGUGCACGAGACGAAGAGGU   1
  **=||||||*|||||||||||
targets:623   CUUACGUGCCCUGCUUCUCCA   643

2.5 Brassica napus NAC domain-containing protein 100-like (LOC106422698), mRNA NAC domain-containing protein 100-like(LOC106422698) coding protein psRNATarget
XM_013894441.1
ncRNA:21   ACGUGCACGAGACGAAGAGGU   1
  *|||*||||*|||||||||||
targets:748   AGCAAGUGCCCUGCUUCUCCA   768

2.5 PREDICTED: Brassica napus NAC domain-containing protein 21/22 (LOC106452350), mRNA NAC domain-containing protein 21/22(LOC106452350) coding protein psRNATarget
NM_001315922.1
ncRNA:21   ACGUGCACGAGACGAAGAGGU   1
  *|||*||||*|||||||||||
targets:671   AGCAAGUGCCCUGCUUCUCCA   691

2.5 Brassica napus NAC domain-containing protein 21/22 (LOC106429030), mRNA NAC domain-containing protein 21/22(LOC106429030) coding protein psRNATarget
KC966749.1
ncRNA:21   ACGUGCACGAGACGAAGAGGU   1
  *|||*||||*|||||||||||
targets:671   AGCAAGUGCCCUGCUUCUCCA   691

2.5 Brassica napus NAC transcription factor 22 (NAC22.1) mRNA, complete cds NA coding protein psRNATarget
XM_013840299.1
ncRNA:21   ACGUGCACGAGACGAAGAGGU   1
  *|||*||||*|||||||||||
targets:734   AGCAAGUGCCCUGCUUCUCCA   754

2.5 PREDICTED: Brassica napus NAC domain-containing protein 21/22-like (LOC106399855), mRNA NAC domain-containing protein 21/22-like(LOC106399855) coding protein psRNATarget
XM_013793969.1
ncRNA:21   ACGUGCACGAGACGAAGAGGU   1
  *|||*||||*|||||||||||
targets:787   AGCAAGUGCCCUGCUUCUCCA   807

2.5 PREDICTED: Brassica napus NAC domain-containing protein 21/22-like (LOC106354108), mRNA NAC domain-containing protein 21/22-like(LOC106354108) coding protein psRNATarget
XM_013835719.1
ncRNA:21   ACGUGCACGAGACGAAGAGGU   1
  *|||*||||*|||||||||||
targets:710   AGCAAGUGCCCUGCUUCUCCA   730

2.5 PREDICTED: Brassica napus NAC domain-containing protein 21/22-like (LOC106395207), mRNA NAC domain-containing protein 21/22-like(LOC106395207) coding protein psRNATarget
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