Search result

BaseInfo

ncRNA ID ath-miRf10579-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - GACGGUGUCGAUCGACACUG - NA
Stem-loop(if miRNA)   --U                   ---C       CAC    C
CC   UCCAGUGUCGAUCGACACC    UAUGGAA   UCUU U
||   |||||||||||||||||||    |||||||   ||||
GG   GGGUCACAGCUAGCUGUGG    AUACCUU   AGAA C
  CCU                   CAGC       AGC    U
Stem-loop sequence CCUUCCAGUGUCGAUCGACACCCUAUGGAACACUCUUCUCUAAGACGAUUCCAUACGACGGUGUCGAUCGACACUGGGUCCGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EF183309.1
ncRNA:20   GUCACAGCUAGCUGUGGCAG   1
  *||||||||||||||||*||
targets:1333   GAGUGUCGAUCGACACCAUC   1352

1.5 Arabidopsis thaliana clone asmbl_5245 unknown mRNA sequence NA coding protein psRNATarget
EF183308.1
ncRNA:20   GUCACAGCUAGCUGUGGCAG   1
  *||||||||||||||||*||
targets:1241   GAGUGUCGAUCGACACCAUC   1260

1.5 Arabidopsis thaliana clone asmbl_5244 unknown mRNA sequence NA coding protein psRNATarget
DQ069810.1
ncRNA:20   GUCACAGCUAGCUGUGGCAG   1
  ==|||||||||||||||*||
targets:210   UGGUGUCGAUCGACACCAUC   229

2.5 Arabidopsis thaliana At2g13270 mRNA, partial sequence NA coding protein psRNATarget