ncRNA ID | ath-miRf10579-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - GACGGUGUCGAUCGACACUG - NA |
Stem-loop(if miRNA) |
  --U                   ---C       CAC    C CC   UCCAGUGUCGAUCGACACC    UAUGGAA   UCUU U ||   |||||||||||||||||||    |||||||   |||| GG   GGGUCACAGCUAGCUGUGG    AUACCUU   AGAA C   CCU                   CAGC       AGC    U |
Stem-loop sequence | CCUUCCAGUGUCGAUCGACACCCUAUGGAACACUCUUCUCUAAGACGAUUCCAUACGACGGUGUCGAUCGACACUGGGUCCGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EF183309.1 |
|
1.5 | Arabidopsis thaliana clone asmbl_5245 unknown mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EF183308.1 |
|
1.5 | Arabidopsis thaliana clone asmbl_5244 unknown mRNA sequence | NA | coding protein | psRNATarget | |||||||||
DQ069810.1 |
|
2.5 | Arabidopsis thaliana At2g13270 mRNA, partial sequence | NA | coding protein | psRNATarget |