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BaseInfo

ncRNA ID novel_bna_miR333
Species Brassica napus
Class miRNA
Genome position ChrC4:56806446-56806669 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR527236
Length 22
Mature sequence(if miRNA) 203 - AGCGACCGAGCCGUGUACAUGC - 224
Stem-loop(if miRNA) ----       U                             GG GA                              CG UG                             -  U
    GUGUACG GCUCGGUCGCUACGUAGCGAUCGAGCUUU  U  GAGCUCGGUCGCUACGUAGCGACCGAGCUU  G  AGAGCUCGGUUGCUACGUAGCGACUGAGC CG G
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    CAUGUGC CGAGCCAGCGAUGCAUCGCUGGCUCGAGA  G  UUUGAGCCAGCGAUGCAUCGCUGGCUCGAG  U  UUUCGAGCUAGCGAUGCAUCGCUGGCUCG GC U
CGUA       -                             GG GC                              AG GG                             U  A
Stem-loop sequence GUGUACGUGCUCGGUCGCUACGUAGCGAUCGAGCUUUGGUGAGAGCUCGGUCGCUACGUAGCGACCGAGCUUCGGUGAGAGCUCGGUUGCUACGUAGCGACUGAGCCGUGUACGUGCUCGGUCGCUACGUAGCGAUCGAGCUUUGGUGAGAGCUCGGUCGCUACGUAGCGACCGAGUUUCGGGGAGAGCUCGGUCGCUACGUAGCGACCGAGCCGUGUACAUGC