ncRNA ID | novel_bna_miR333 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC4:56806446-56806669 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR527236 |
Length | 22 |
Mature sequence(if miRNA) | 203 - AGCGACCGAGCCGUGUACAUGC - 224 |
Stem-loop(if miRNA) |
----       U                             GG GA                              CG UG                             -  U     GUGUACG GCUCGGUCGCUACGUAGCGAUCGAGCUUU  U  GAGCUCGGUCGCUACGUAGCGACCGAGCUU  G  AGAGCUCGGUUGCUACGUAGCGACUGAGC CG G     ||||||| |||||||||||||||||||||||||||||  |  ||||||||||||||||||||||||||||||  |  ||||||||||||||||||||||||||||| ||     CAUGUGC CGAGCCAGCGAUGCAUCGCUGGCUCGAGA  G  UUUGAGCCAGCGAUGCAUCGCUGGCUCGAG  U  UUUCGAGCUAGCGAUGCAUCGCUGGCUCG GC U CGUA       -                             GG GC                              AG GG                             U  A |
Stem-loop sequence | GUGUACGUGCUCGGUCGCUACGUAGCGAUCGAGCUUUGGUGAGAGCUCGGUCGCUACGUAGCGACCGAGCUUCGGUGAGAGCUCGGUUGCUACGUAGCGACUGAGCCGUGUACGUGCUCGGUCGCUACGUAGCGAUCGAGCUUUGGUGAGAGCUCGGUCGCUACGUAGCGACCGAGUUUCGGGGAGAGCUCGGUCGCUACGUAGCGACCGAGCCGUGUACAUGC |