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BaseInfo

ncRNA ID	novel_bna_miR330
Species	Brassica napus
Class	miRNA
Genome position	ChrC3:32849873-32849971 [-]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR527236
Length	21
Mature sequence(if miRNA)	79 - AGCAUAACCAUACCAAAGCUG - 99
Stem-loop(if miRNA)	--      A    A           C       GU         UGAUU   AGCAUA CCAU CCAAAGCUGUA ACGUCAG  UUAGCCGAC     A   |||||| |||| ||||||||||| |||||||  |||||||||     A   UCGUAU GGUA GGUUUCGAUAU UGUAGUC  AAUCGGCUG     U AU      C    G           U       UG         UGACA
Stem-loop sequence	AGCAUAACCAUACCAAAGCUGUACACGUCAGGUUUAGCCGACUGAUUAAUACAGUGUCGGCUAAGUCUGAUGUUUAUAGCUUUGGGAUGGCUAUGCUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013786651.1	ncRNA:21   GUCGAAACCAUACCAAUACGA   1   *|**||||||||||||||||* targets:624   AAAAUUUGGUAUGGUUAUGCA   644 Target Full Sequence	3.0	PREDICTED: Brassica napus tetraketide alpha-pyrone reductase 2-like (LOC106347157), mRNA	tetraketide alpha-pyrone reductase 2-like(LOC106347157)	coding protein	psRNATarget
XM_013786655.1	ncRNA:21   GUCGAAACCAUACCAAUACGA   1   *|**||||||||||||||||* targets:627   AAAAUUUGGUAUGGUUAUGCA   647 Target Full Sequence	3.0	PREDICTED: Brassica napus tetraketide alpha-pyrone reductase 2-like (LOC106347160), mRNA	tetraketide alpha-pyrone reductase 2-like(LOC106347160)	coding protein	psRNATarget
XM_013786650.1	ncRNA:21   GUCGAAACCAUACCAAUACGA   1   *|**||||||||||||||||* targets:627   AAAAUUUGGUAUGGUUAUGCA   647 Target Full Sequence	3.0	PREDICTED: Brassica napus tetraketide alpha-pyrone reductase 2-like (LOC106347156), mRNA	tetraketide alpha-pyrone reductase 2-like(LOC106347156)	coding protein	psRNATarget
XM_013842313.1	ncRNA:21   GUCGAAACCAUACCAAUACGA   1   *|**||||||||||||||||* targets:612   AAAAUUUGGUAUGGUUAUGCA   632 Target Full Sequence	3.0	PREDICTED: Brassica napus tetraketide alpha-pyrone reductase 2-like (LOC106401738), mRNA	tetraketide alpha-pyrone reductase 2-like(LOC106401738)	coding protein	psRNATarget