ncRNA ID | novel_bna_miR329 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC3:21712174-21712258 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR527236 |
Length | 21 |
Mature sequence(if miRNA) | 65 - ACAAAGUUUUAUACUGAUAAU - 85 |
Stem-loop(if miRNA) |
--          U       A  UG  A    C      CUU   UGUUAGUAUA AACUUUG UU  AU CAAA UGAUUA   A   |||||||||| ||||||| ||  || |||| ||||||   U   AUAGUCAUAU UUGAAAC AG  UA GUUU ACUAGU   U UA          U       A  GU  C    C      UUU |
Stem-loop sequence | UGUUAGUAUAUAACUUUGAUUUGAUACAAACUGAUUACUUAUUUUUUGAUCACUUUGCAUUGGAACAAAGUUUUAUACUGAUAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013799540.1 |
|
2.5 | PREDICTED: Brassica napus zinc finger MYM-type protein 1-like (LOC106359914), mRNA | zinc finger MYM-type protein 1-like(LOC106359914) | coding protein | psRNATarget | |||||||||
XM_013877706.1 |
|
3.0 | PREDICTED: Brassica napus uncharacterized LOC106436758 (LOC106436758), mRNA | uncharacterized LOC106436758(LOC106436758) | coding protein | psRNATarget |