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BaseInfo

ncRNA ID	novel_bna_miR327
Species	Brassica napus
Class	miRNA
Genome position	ChrC3:437490-437626 [-]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR527236
Length	22
Mature sequence(if miRNA)	116 - UCUGCUAUAAACGCCUGCCCUU - 137
Stem-loop(if miRNA)	--  U          CCU        CA    A  --------------             A     A   -G  U   UC GCUAUAAACG   GCCCUUUG  GGAA GA              GCAAAAUCUUUGU AUCAA AUA  GA A   || ||||||||||   ||||||||  |||| ||              ||||||||||||| ||||| |||  ||   AG CGAUAUUUGC   CGGGAAAC  CCUU CU              CGUUUUAGAAACA UAGUU UAU  CU C AA  C          -UU        AG    -  CCCUCUCUGUUCCC             A     G   GA  A
Stem-loop sequence	UCUGCUAUAAACGCCUGCCCUUUGCAGGAAAGAGCAAAAUCUUUGUAAUCAAAAUAGGAUACAUCAGUAUGUUGAUAACAAAGAUUUUGCCCCUUGUCUCUCCCUCUUCCGACAAAGGGCUUCGUUUAUAGCCGAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013865861.1	ncRNA:22   UUCCCGUCCGCAAAUAUCGUCU   1   *=***|||*||||||||||||| targets:517   CGCUUCAGUCGUUUAUAGCAGA   538 Target Full Sequence	3.0	PREDICTED: Brassica napus uncharacterized LOC106423042 (LOC106423042), transcript variant X4, mRNA	uncharacterized LOC106423042(LOC106423042)	coding protein	psRNATarget
XM_013883220.1	ncRNA:22   UUCCCGUCCGCAAAUAUCGUCU   1   *=***|||*||||||||||||| targets:518   CGCUUCAGUCGUUUAUAGCAGA   539 Target Full Sequence	3.0	PREDICTED: Brassica napus uncharacterized LOC106441365 (LOC106441365), mRNA	uncharacterized LOC106441365(LOC106441365)	coding protein	psRNATarget
XM_013864673.1	ncRNA:22   UUCCCGUCCGCAAAUAUCGUCU   1   *=***|||*||||||||||||| targets:537   CGCUUCAGUCGUUUAUAGCAGA   558 Target Full Sequence	3.0	PREDICTED: Brassica napus uncharacterized LOC106423042 (LOC106423042), transcript variant X2, mRNA	uncharacterized LOC106423042(LOC106423042)	coding protein	psRNATarget
XM_013865303.1	ncRNA:22   UUCCCGUCCGCAAAUAUCGUCU   1   *=***|||*||||||||||||| targets:515   CGCUUCAGUCGUUUAUAGCAGA   536 Target Full Sequence	3.0	PREDICTED: Brassica napus uncharacterized LOC106423042 (LOC106423042), transcript variant X3, mRNA	uncharacterized LOC106423042(LOC106423042)	coding protein	psRNATarget
XM_013864114.1	ncRNA:22   UUCCCGUCCGCAAAUAUCGUCU   1   *=***|||*||||||||||||| targets:515   CGCUUCAGUCGUUUAUAGCAGA   536 Target Full Sequence	3.0	PREDICTED: Brassica napus uncharacterized LOC106423042 (LOC106423042), transcript variant X1, mRNA	uncharacterized LOC106423042(LOC106423042)	coding protein	psRNATarget