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BaseInfo

ncRNA ID	ath-miRf10578-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - CAACUGCAACUGCUUGUAUA - NA
Stem-loop(if miRNA)	AACG                         UAUUCUCAUUUAUUAG  A  UAUAAAGCUGUUUGGUCUCCAUA AUCA    GCAAGCAGUUGCAGUUGCAGAGAUA                AC UG                       G ||||    |||||||||||||||||||||||||                || ||                       A UGGU    UGUUCGUCAACGUCAACGUUUCUAU                CU GA                       A     CAUA                         --------------UU  U  AUUUGUCUAGAUGCACAUGUUGA
Stem-loop sequence	AUCAAACGGCAAGCAGUUGCAGUUGCAGAGAUAUAUUCUCAUUUAUUAGACAUGUAUAAAGCUGUUUGGUCUCCAUAGAAAGUUGUACACGUAGAUCUGUUUAAGUUCUUUAUCUUUGCAACUGCAACUGCUUGUAUACUGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001336836.1	ncRNA:20   AUAUGUUCGUCAACGUCAAC   1   |=|||||||||||||||*|| targets:1013   UGUACAAGCAGUUGCAGAUG   1032 Target Full Sequence	2.5	Arabidopsis thaliana DUF399 family protein, putative (DUF399 and DUF3411) mRNA	DUF399 family protein, putative (DUF399 and DUF3411)(AT2G40400)	coding protein	psRNATarget
AY102131.1	ncRNA:20   AUAUGUUCGUCAACGUCAAC   1   |=|||||||||||||||*|| targets:984   UGUACAAGCAGUUGCAGAUG   1003 Target Full Sequence	2.5	Arabidopsis thaliana At2g40400/T3G21.17 mRNA, complete cds	NA	coding protein	psRNATarget
AK226837.1	ncRNA:20   AUAUGUUCGUCAACGUCAAC   1   |=|||||||||||||||*|| targets:994   UGUACAAGCAGUUGCAGAUG   1013 Target Full Sequence	2.5	Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL08-12-E11	NA	coding protein	psRNATarget
AF410285.1	ncRNA:20   AUAUGUUCGUCAACGUCAAC   1   |=|||||||||||||||*|| targets:1009   UGUACAAGCAGUUGCAGAUG   1028 Target Full Sequence	2.5	Arabidopsis thaliana At2g40400/T3G21.17 mRNA, complete cds	NA	coding protein	psRNATarget
NM_179998.2	ncRNA:20   AUAUGUUCGUCAACGUCAAC   1   |=|||||||||||||||*|| targets:1090   UGUACAAGCAGUUGCAGAUG   1109 Target Full Sequence	2.5	Arabidopsis thaliana DUF399 family protein, putative (DUF399 and DUF3411) mRNA	DUF399 family protein, putative (DUF399 and DUF3411)(AT2G40400)	coding protein	psRNATarget
NM_129600.4	ncRNA:20   AUAUGUUCGUCAACGUCAAC   1   |=|||||||||||||||*|| targets:1158   UGUACAAGCAGUUGCAGAUG   1177 Target Full Sequence	2.5	Arabidopsis thaliana DUF399 family protein, putative (DUF399 and DUF3411) mRNA	DUF399 family protein, putative (DUF399 and DUF3411)(AT2G40400)	coding protein	psRNATarget