ncRNA ID | novel_bna_miR325 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC6:27508121-27508260 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363495 |
Length | 23 |
Mature sequence(if miRNA) | 118 - CUUAAAGUGGAGUUCUUAGCGGA - 140 |
Stem-loop(if miRNA) |
--C        GA   C                 C                                  C    UUAAAGUG  GUU UUAGCGGAAUAUAAGAA CCGUCUCUUAACUUUUAACUAAAAAAGCUAAGAA C    ||||||||  ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    AAUUUCAC  CAA AAUUGCUUUAUAUUCUU GGCAGAGAAUUGAAAAUUGAUUUUUUCGAUUCUU G AAA        UC   A                 A                                  G |
Stem-loop sequence | CUUAAAGUGGAGUUCUUAGCGGAAUAUAAGAACCCGUCUCUUAACUUUUAACUAAAAAAGCUAAGAACCGGUUCUUAGCUUUUUUAGUUAAAAGUUAAGAGACGGAUUCUUAUAUUUCGUUAAAAACCUCACUUUAAAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013832316.1 |
|
2.5 | PREDICTED: Brassica napus bZIP transcription factor 17-like (LOC106391630), mRNA | bZIP transcription factor 17-like(LOC106391630) | coding protein | psRNATarget |