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BaseInfo

ncRNA ID	novel_bna_miR324
Species	Brassica napus
Class	miRNA
Genome position	ChrC2:7652070-7652200 [-]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR527236
Length	24
Mature sequence(if miRNA)	1 - AGAAACAGUUUCUUAACUUCCACU - 24
Stem-loop(if miRNA)	--C                            UA          A                    UA    GGAAGUUAAGAAACUGUUUCUUAACUUU  UAACUAAAAA GCUAAGAACCGGUUUUUAAA  A    ||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||  G    CCUUCAAUUCUUUGACAAAGAAUUGAAG  AUUGAUUUUU CGAUUCUUGGCCAAGAAUUU  G UCA                            --          C                    CA
Stem-loop sequence	CGGAAGUUAAGAAACUGUUUCUUAACUUUUAUAACUAAAAAAGCUAAGAACCGGUUUUUAAAUAAGGACUUUAAGAACCGGUUCUUAGCCUUUUUAGUUAGAAGUUAAGAAACAGUUUCUUAACUUCCACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013888792.1	ncRNA:24   UCACCUUCAAUUCUUUGACAAAGA   1   |**|||||||||*||||||||||| targets:1808   AUCGGAAGUUAAAAAACUGUUUCU   1831 Target Full Sequence	1.5	PREDICTED: Brassica napus UDP-glycosyltransferase 71B5-like (LOC106446953), mRNA	UDP-glycosyltransferase 71B5-like(LOC106446953)	coding protein	psRNATarget
XM_013817285.1	ncRNA:24   UCACCUUCAAUUCUUUGACAAAGA   1   |**|||||||||*||||||||||| targets:2854   AUCGGAAGUUAAAAAACUGUUUCU   2877 Target Full Sequence	1.5	PREDICTED: Brassica napus UDP-glycosyltransferase 71B5-like (LOC106377115), mRNA	UDP-glycosyltransferase 71B5-like(LOC106377115)	coding protein	psRNATarget
XM_013866316.1	ncRNA:24   UCACCUUCAAUUCUUUGACAAAGA   1   ||**|||||||||||||*|||||| targets:425   AGCAGAAGUUAAGAAACAGUUUCU   448 Target Full Sequence	1.5	PREDICTED: Brassica napus uncharacterized LOC106425589 (LOC106425589), mRNA	uncharacterized LOC106425589(LOC106425589)	coding protein	psRNATarget
XM_013808388.1	ncRNA:24   UCACCUUCAAUUCUUUGACAAAGA   1   **||||||||*||||||||||*|| targets:391   UUUGGAAGUUUAGAAACUGUUCCU   414 Target Full Sequence	2.5	PREDICTED: Brassica napus LETM1 and EF-hand domain-containing protein 1, mitochondrial-like (LOC106368430), transcript variant X1, mRNA	LETM1 and EF-hand domain-containing protein 1, mitochondrial-like(LOC106368430)	coding protein	psRNATarget
XM_013808389.1	ncRNA:24   UCACCUUCAAUUCUUUGACAAAGA   1   **||||||||*||||||||||*|| targets:414   UUUGGAAGUUUAGAAACUGUUCCU   437 Target Full Sequence	2.5	PREDICTED: Brassica napus LETM1 and EF-hand domain-containing protein 1, mitochondrial-like (LOC106368430), transcript variant X2, mRNA	LETM1 and EF-hand domain-containing protein 1, mitochondrial-like(LOC106368430)	coding protein	psRNATarget
XM_013852504.1	ncRNA:24   UCACCUUCAAUUCUUUGACAAAGA   1   =***|||||*||||||||||||=| targets:648   GAAUGAAGUAAAGAAACUGUUUUU   671 Target Full Sequence	2.5	PREDICTED: Brassica napus nucleoid-associated protein PCC8801_2554-like (LOC106411697), mRNA	nucleoid-associated protein PCC8801_2554-like(LOC106411697)	coding protein	psRNATarget