| ncRNA ID | novel_bna_miR317 |
| Species | Brassica napus |
| Class | miRNA |
| Genome position | ChrC1:13504962-13505050 [+] |
| Reference genome | Brassica_napus_assembly_v1.0 |
| Source | SRR527236;SRR527229 |
| Length | 22 |
| Mature sequence(if miRNA) | 68 - AGAUGCUCAUUUGAGCAAGCAA - 89 |
| Stem-loop(if miRNA) |
--U UC - U UU GA C CUUGCUUAAAUGAGUAU CAUGAA AG GA CU CUCA G ||||||||||||||||| |||||| || || || |||| GAACGAGUUUACUCGUA GUACUU UC CU GG GAGU C AAC GA C U CU UC A |
| Stem-loop sequence | UCUUGCUUAAAUGAGUAUUCCAUGAAAGUGAUUCUGACUCACGCAUGAGCUGGUCUCUCUCUUCAUGAGAUGCUCAUUUGAGCAAGCAA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_013786601.1 |
|
2.5 | PREDICTED: Brassica napus uncharacterized LOC106347107 (LOC106347107), transcript variant X1, mRNA | uncharacterized LOC106347107(LOC106347107) | coding protein | psRNATarget | |||||||||
| XM_013851524.1 |
|
3.0 | PREDICTED: Brassica napus pumilio homolog 6, chloroplastic-like (LOC106410896), mRNA | pumilio homolog 6, chloroplastic-like(LOC106410896) | coding protein | psRNATarget |