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BaseInfo

ncRNA ID novel_bna_miR298
Species Brassica napus
Class miRNA
Genome position ChrA4:36410596-36410778 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR527236
Length 24
Mature sequence(if miRNA) 1 - AACUUGGGUGUGAUCCCGGAAUGA - 24
Stem-loop(if miRNA) --      C    C              U    GG              U     --------A     -  U       AGAUUCGGG           
  AUUCCG GAUC CAUCCAAGUUUCAU CCUG  AGUAAGACGUCAGU GGGUA         UUGCC CA GAUCUUA         UCCUCCAAUGUU
  |||||| |||| |||||||||||||| ||||  |||||||||||||| |||||         ||||| || |||||||         |||||||||||A
  UAAGGC CUAG GUGGGUUCAAAGUA GGGC  UCAUUUUGCAGUCA CCCAU         GACGG GU CUAGGGU         GGGAGGUUAUAU
AG      C    U              U    AA              C     CAGUUUUUA     U  U       ---------           
Stem-loop sequence AUUCCGCGAUCCCAUCCAAGUUUCAUUCCUGGGAGUAAGACGUCAGUUGGGUAAUUGCCCAUGAUCUUAAGAUUCGGGUCCUCCAAUGUUAUAUAUUGGAGGGUGGGAUCUUGUGGCAGAUUUUUGACUACCCCACUGACGUUUUACUAACGGGUAUGAAACUUGGGUGUGAUCCCGGAAUGA