ncRNA ID | novel_bna_miR296 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA3:13830650-13830814 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR527234 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AAAUGCUCCAAUGUAUACCUC - 21 |
Stem-loop(if miRNA) |
--     C       U      C       A             -UACA              AAAUUAU         C  U   AAAUG UCCAAUG AUACCU UAUAAUA AGUUUUUCUAUUU     GAAAAAUAUAGAGA       UUUUUGCCU UA A   ||||| ||||||| |||||| ||||||| |||||||||||||     ||||||||||||||       ||||||||| ||   UUUAC AGGUUAC UAUGGA AUAUUAU UCAAGAAGAUAAA     CUUUUUAUAUCUCU       AAAAAUGGA AU U UU     A       U      C       C             UAUCC              AUACAAU         A  U |
Stem-loop sequence | AAAUGCUCCAAUGUAUACCUCUAUAAUAAAGUUUUUCUAUUUUACAGAAAAAUAUAGAGAAAAUUAUUUUUUGCCUCUAUAUUUAAAGGUAAAAAUAACAUAUCUCUAUAUUUUUCCCUAUAAAUAGAAGAACUCUAUUAUACAGGUAUUCAUUGGAACAUUUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013818358.1 |
|
3.0 | PREDICTED: Brassica napus putative wall-associated receptor kinase-like 16 (LOC106378189), mRNA | putative wall-associated receptor kinase-like 16(LOC106378189) | coding protein | psRNATarget |