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BaseInfo

ncRNA ID novel_bna_miR287
Species Brassica napus
Class miRNA
Genome position ChrA10:19632051-19632265 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR527234
Length 24
Mature sequence(if miRNA) 1 - AAUUCUAUUGGUCGGUAAACCUCA - 24
Stem-loop(if miRNA) --     G   A                     C                      A                           CUUACUAC  UUUUUUAUUUUUUAUU
  AGGUU ACC ACCAAUAGGAUUUCAUUAUUU AAAUUCGAUAUCUUUUAAAAAA AAAACAAAAUAUUGUCAAGUUAUAUUA        UA                U
  ||||| ||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||        ||                U
  UCCAA UGG UGGUUAUCUUAAAGUAAUAAA UUUAAGCUAUAGAAAAUUUUUU UUUUGUUUUAUAACAGUUUAAUGUAAU        AA                U
AC     A   C                     A                      A                           ------AC  AAAUUUAAUUUUCUAU
Stem-loop sequence AGGUUGACCAACCAAUAGGAUUUCAUUAUUUCAAAUUCGAUAUCUUUUAAAAAAAAAAACAAAAUAUUGUCAAGUUAUAUUACUUACUACUAUUUUUUAUUUUUUAUUUUUUAUCUUUUAAUUUAAAAACAUAAUGUAAUUUGACAAUAUUUUGUUUUAUUUUUUAAAAGAUAUCGAAUUUAAAAUAAUGAAAUUCUAUUGGUCGGUAAACCUCA