ncRNA ID | novel_bna_miR287 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA10:19632051-19632265 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR527234 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUUCUAUUGGUCGGUAAACCUCA - 24 |
Stem-loop(if miRNA) |
--     G   A                     C                      A                           CUUACUAC  UUUUUUAUUUUUUAUU   AGGUU ACC ACCAAUAGGAUUUCAUUAUUU AAAUUCGAUAUCUUUUAAAAAA AAAACAAAAUAUUGUCAAGUUAUAUUA        UA                U   ||||| ||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||        ||                U   UCCAA UGG UGGUUAUCUUAAAGUAAUAAA UUUAAGCUAUAGAAAAUUUUUU UUUUGUUUUAUAACAGUUUAAUGUAAU        AA                U AC     A   C                     A                      A                           ------AC  AAAUUUAAUUUUCUAU |
Stem-loop sequence | AGGUUGACCAACCAAUAGGAUUUCAUUAUUUCAAAUUCGAUAUCUUUUAAAAAAAAAAACAAAAUAUUGUCAAGUUAUAUUACUUACUACUAUUUUUUAUUUUUUAUUUUUUAUCUUUUAAUUUAAAAACAUAAUGUAAUUUGACAAUAUUUUGUUUUAUUUUUUAAAAGAUAUCGAAUUUAAAAUAAUGAAAUUCUAUUGGUCGGUAAACCUCA |