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BaseInfo

ncRNA ID ath-miRf10574-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - CGGCAAGUCAUCCUUGGCUGC - NA
Stem-loop(if miRNA)     CAA         G     CA       A   AUA    C    --    --AU    CA
AGAG   AAUGUAGCC AAGGA  ACUUGCC GAA   UGUU AUCA  CAUA    UAAU  U
||||   ||||||||| |||||  ||||||| |||   |||| ||||  ||||    ||||
UCUC   UUACGUCGG UUCCU  UGAACGG CUU   ACAA UGGU  GUAU    AUUA  C
    AUA         -     AC       C   GCA    U    AC    ACUU    CA
Stem-loop sequence AGAGCAAAAUGUAGCCGAAGGACAACUUGCCAGAAAUAUGUUCAUCACAUAAUUAAUCAUCACAUUAUUCAUAUGCAUGGUUAACAACGUUCCGGCAAGUCAUCCUUGGCUGCAUUAUACUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JA894695.1
ncRNA:21   CGUCGGUUCCUACUGAACGGC   1
  |||||||||||||||||||||
targets:17   GCAGCCAAGGAUGACUUGCCG   37

0.0 Sequence 12 from Patent WO2011067745 NA coding protein psRNATarget
JA894877.1
ncRNA:21   CGUCGGUUCCUACUGAACGGC   1
  |||||||||||||||||||||
targets:17   GCAGCCAAGGAUGACUUGCCG   37

0.0 Sequence 194 from Patent WO2011067745 NA coding protein psRNATarget
JA894699.1
ncRNA:21   CGUCGGUUCCUACUGAACGGC   1
  **|||||||||||||||||||
targets:41   UGAGCCAAGGAUGACUUGCCG   61

0.0 Sequence 16 from Patent WO2011067745 NA coding protein psRNATarget