Search result

BaseInfo

ncRNA ID	novel_bna_miR285
Species	Brassica napus
Class	miRNA
Genome position	ChrC9:9031317-9031488 [+]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR527234;SRR537600;SRR537612
Length	21
Mature sequence(if miRNA)	1 - UGAAAAUGCUCCAAUGUAUGU - 21
Stem-loop(if miRNA)	--                    UC           U  AA       A                  UAU   --A   C        A   UGAAAAUGCUCCAAUGUAUG  UUUAUAAUAGA UU  UCUAUUU UAGAGGAAAAUAUAGAGA   GAU   UUU UACCUCUA A   ||||||||||||||||||||  ||||||||||| ||  ||||||| ||||||||||||||||||   |||   ||| ||||||||   ACUUUUACGAGGUUACAUAC  AGAUGUUAUCU AA  AGAUAAA AUCUUCUUUUAUAUUUCU   UUA   AAA AUGGAGAU U CG                    GA           C  GG       -                  -UU   AUG   A        A
Stem-loop sequence	UGAAAAUGCUCCAAUGUAUGUCUUUAUAAUAGAUUUAAUCUAUUUAUAGAGGAAAAUAUAGAGAUAUGAUAUUUCUACCUCUAAAUAUAGAGGUAAAAAGUAAUUUUUCUUUAUAUUUUCUUCUAAAAUAGAGGAACUCUAUUGUAGAAGCAUACAUUGGAGCAUUUUCAGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013804456.1	ncRNA:21   UGUAUGUAACCUCGUAAAAGU   1   |=|||||||||||||*||||| targets:7   AUAUACAUUGGAGCAAUUUCA   27 Target Full Sequence	1.5	PREDICTED: Brassica napus expansin-A23-like (LOC106364991), mRNA	expansin-A23-like(LOC106364991)	coding protein	psRNATarget