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BaseInfo

ncRNA ID novel_bna_miR282
Species Brassica napus
Class miRNA
Genome position ChrC8:12920645-12920836 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR527234
Length 22
Mature sequence(if miRNA) 1 - UUAACCCGAAGUUCUUAGGAUG - 22
Stem-loop(if miRNA) --     C   A            A              A    U                             CC            C     UA
  UUAAC CGA GUUCUUAGGAUG AGUUAUUAGCGGAA UUAA AAACUGUUUUUUAAUUUUUAAUUAAAAAA  UAAGAACCGGUU UUAGA  A
  ||||| ||| |||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||  |||||||||||| |||||  A
  AAUUG GCU CAAGAAUUUUAC UCAAUAAUUGUCUU AAUU UUUGACAAAGAAUUGAAAAUUAGUUUUUU  AUUCUUGGCCAA AAUUU  A
CU     A   -            C              A    C                             CA            U     CA
Stem-loop sequence UUAACCCGAAGUUCUUAGGAUGAAGUUAUUAGCGGAAAUUAAUAAACUGUUUUUUAAUUUUUAAUUAAAAAACCUAAGAACCGGUUCUUAGAUAAAAACUUUAAUAACCGGUUCUUAACUUUUUUGAUUAAAAGUUAAGAAACAGUUUCUUAAAUUCUGUUAAUAACUCCAUUUUAAGAACUCGAGUUAAUC