ncRNA ID | novel_bna_miR282 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC8:12920645-12920836 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR527234 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UUAACCCGAAGUUCUUAGGAUG - 22 |
Stem-loop(if miRNA) |
--     C   A            A              A    U                             CC            C     UA   UUAAC CGA GUUCUUAGGAUG AGUUAUUAGCGGAA UUAA AAACUGUUUUUUAAUUUUUAAUUAAAAAA  UAAGAACCGGUU UUAGA  A   ||||| ||| |||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||  |||||||||||| |||||  A   AAUUG GCU CAAGAAUUUUAC UCAAUAAUUGUCUU AAUU UUUGACAAAGAAUUGAAAAUUAGUUUUUU  AUUCUUGGCCAA AAUUU  A CU     A   -            C              A    C                             CA            U     CA |
Stem-loop sequence | UUAACCCGAAGUUCUUAGGAUGAAGUUAUUAGCGGAAAUUAAUAAACUGUUUUUUAAUUUUUAAUUAAAAAACCUAAGAACCGGUUCUUAGAUAAAAACUUUAAUAACCGGUUCUUAACUUUUUUGAUUAAAAGUUAAGAAACAGUUUCUUAAAUUCUGUUAAUAACUCCAUUUUAAGAACUCGAGUUAAUC |