ncRNA ID | novel_bna_miR277 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC7:18896578-18896658 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR527234;SRR537603;SRR538067;SRR2015555 |
Length | 21 |
Mature sequence(if miRNA) | 61 - GCGUAUGAGGAGCCAAGCAUA - 81 |
Stem-loop(if miRNA) |
--   C       CU         A   UA  U  AU  A   UGC UGGCUCC  GUAUGCCAU CAC  AG UC  CG U   ||| |||||||  ||||||||| |||  || ||  || C   ACG ACCGAGG  UAUGCGGUA GUG  UC AG  GC U AU   A       AG         G   CC  C  CG  U |
Stem-loop sequence | UGCCUGGCUCCCUGUAUGCCAUACACUAAGUUCAUCGAUCUUCGGCGACCUCCGUGGAUGGCGUAUGAGGAGCCAAGCAUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013884445.1 |
|
3.0 | PREDICTED: Brassica napus uncharacterized LOC106442802 (LOC106442802), mRNA | uncharacterized LOC106442802(LOC106442802) | coding protein | psRNATarget | |||||||||
XM_013814132.1 |
|
3.0 | PREDICTED: Brassica napus uncharacterized LOC106374027 (LOC106374027), mRNA | uncharacterized LOC106374027(LOC106374027) | coding protein | psRNATarget |