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BaseInfo

ncRNA ID novel_bna_miR274
Species Brassica napus
Class miRNA
Genome position ChrC5:31509446-31509557 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR527234
Length 20
Mature sequence(if miRNA) 1 - CACCCUUUAUGACCAAUCAA - 20
Stem-loop(if miRNA) --A      -      A  U   GUA        A     -  ACA          UC
   AUUGGU GUAGAG GU GAG   AAUUUAAG GUUCA CC   AGGGGGUGAA  C
   |||||| |||||| || |||   |||||||| ||||| ||   ||||||||||  A
   UAACCA UAUUUC CA CUC   UUAAAUUU CAAGU GG   UCCCCCACUU  A
AAC      G      C  C   -AA        C     A  --A          UG
Stem-loop sequence AAUUGGUGUAGAGAGUUGAGGUAAAUUUAAGAGUUCACCACAAGGGGGUGAAUCCAAGUUUCACCCCCUAGGAUGAACCUUUAAAUUAACUCCACCCUUUAUGACCAAUCAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013894194.1
ncRNA:20   AACUAACCAGUAUUUCCCAC   1
  *||||||||||*|||||||*
targets:1081   GUGAUUGGUCAAAAAGGGUU   1100

2.5 PREDICTED: Brassica napus cytochrome P450 76C2-like (LOC106452163), mRNA cytochrome P450 76C2-like(LOC106452163) coding protein psRNATarget