ncRNA ID | novel_bna_miR274 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC5:31509446-31509557 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR527234 |
Length | 20 |
Mature sequence(if miRNA) | 1 - CACCCUUUAUGACCAAUCAA - 20 |
Stem-loop(if miRNA) |
--A      -      A  U   GUA        A     -  ACA          UC    AUUGGU GUAGAG GU GAG   AAUUUAAG GUUCA CC   AGGGGGUGAA  C    |||||| |||||| || |||   |||||||| ||||| ||   ||||||||||  A    UAACCA UAUUUC CA CUC   UUAAAUUU CAAGU GG   UCCCCCACUU  A AAC      G      C  C   -AA        C     A  --A          UG |
Stem-loop sequence | AAUUGGUGUAGAGAGUUGAGGUAAAUUUAAGAGUUCACCACAAGGGGGUGAAUCCAAGUUUCACCCCCUAGGAUGAACCUUUAAAUUAACUCCACCCUUUAUGACCAAUCAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013894194.1 |
|
2.5 | PREDICTED: Brassica napus cytochrome P450 76C2-like (LOC106452163), mRNA | cytochrome P450 76C2-like(LOC106452163) | coding protein | psRNATarget |