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BaseInfo

ncRNA ID novel_bna_miR264
Species Brassica napus
Class miRNA
Genome position ChrA7:20502529-20502609 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363495
Length 21
Mature sequence(if miRNA) 1 - ACUUUGAAGCACUUUUGAGGC - 21
Stem-loop(if miRNA) --   ---U      ACU       CUA        - AA GAU
  ACU    UGAAGC   UUUGAGG   CAGCUUGU C  G   A
  |||    ||||||   |||||||   |||||||| |  |
  UGG    ACUUCG   AGGCUCC   GUCGGAUA G  C   A
GG   CUGU      ---       CUG        U AA AGG
Stem-loop sequence ACUUUGAAGCACUUUUGAGGCUACAGCUUGUCAAGGAUAAGGACAAGUAUAGGCUGGUCCCUCGGAGCUUCAUGUCGGUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013818833.1
ncRNA:21   CGGAGUUUUCACGAAGUUUCA   1
  *=*|||||||*||||||||||
targets:898   AUGUCAAAAGAGCUUCAAAGU   918

2.5 PREDICTED: Brassica napus glutamate receptor 1.3-like (LOC106378751), mRNA glutamate receptor 1.3-like(LOC106378751) coding protein psRNATarget