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BaseInfo

ncRNA ID	novel_bna_miR254
Species	Brassica napus
Class	miRNA
Genome position	ChrA6:41101733-41101782 [-]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR527234;SRR538225
Length	21
Mature sequence(if miRNA)	1 - UUGCGGCUAAGAAACGAACAC - 21
Stem-loop(if miRNA)	--    AA           ----   C   GUUU  UUUUUGGCCGC    UGC A   ||||  |||||||||||    |||   CAAG  AAGAAUCGGCG    GCG C CA    CA           UUCU   U
Stem-loop sequence	GUUUAAUUUUUGGCCGCUGCCACUGCGUCUUGCGGCUAAGAAACGAACAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013816092.1	ncRNA:21   CACAAGCAAAGAAUCGGCGUU   1   ||||||||||||||||||||| targets:335   GUGUUCGUUUCUUAGCCGCAA   355 Target Full Sequence	0.0	PREDICTED: Brassica napus uncharacterized LOC106376048 (LOC106376048), mRNA	uncharacterized LOC106376048(LOC106376048)	coding protein	psRNATarget
XM_013873453.1	ncRNA:21   CACAAGCAAAGAAUCGGCGUU   1   *|||||||||||*|||||||= targets:2188   UUGUUCGUUUCUGAGCCGCAG   2208 Target Full Sequence	2.5	PREDICTED: Brassica napus probable LRR receptor-like serine/threonine-protein kinase At4g36180 (LOC106432610), transcript variant X1, mRNA	probable LRR receptor-like serine/threonine-protein kinase At4g36180(LOC106432610)	coding protein	psRNATarget
XM_013873455.1	ncRNA:21   CACAAGCAAAGAAUCGGCGUU   1   *|||||||||||*|||||||= targets:1442   UUGUUCGUUUCUGAGCCGCAG   1462 Target Full Sequence	2.5	PREDICTED: Brassica napus probable LRR receptor-like serine/threonine-protein kinase At4g36180 (LOC106432610), transcript variant X2, mRNA	probable LRR receptor-like serine/threonine-protein kinase At4g36180(LOC106432610)	coding protein	psRNATarget