ncRNA ID | novel_bna_miR253 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA10:14342675-14342844 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR527234 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AACCCUUGGGUAAACCCUGAACCC - 24 |
Stem-loop(if miRNA) |
--                      C  UA        C            A    -       UC     --      AACCCUAA   AACCCUUGGGUAAACCCUGAAC CU  GAUAAAUC UAAACUCUAAAU AAAA CACUAAA  CUAAA  ACUCUA        A   |||||||||||||||||||||| ||  |||||||| |||||||||||| |||| |||||||  |||||  ||||||        U   UUGGGAACCCAUUUGGGAUUUG GA  CUAUUUAG AUUUGAGAUUUA UUUU GUGAUUU  GAUUU  UGAGAU        C AU                      A  UC        A            G    A       GU     UG      CCCAAAUC |
Stem-loop sequence | AACCCUUGGGUAAACCCUGAACCCUUAGAUAAAUCCUAAACUCUAAAUAAAAACACUAAAUCCUAAAACUCUAAACCCUAAAUCCUAAACCCUAGAGUGUUUUAGUGUUUAGUGAUUUUGAUUUAGAGUUUAAGAUUUAUCCUAGAGUUUAGGGUUUACCCAAGGGUUUA |