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BaseInfo

ncRNA ID novel_bna_miR253
Species Brassica napus
Class miRNA
Genome position ChrA10:14342675-14342844 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR527234
Length 24
Mature sequence(if miRNA) 1 - AACCCUUGGGUAAACCCUGAACCC - 24
Stem-loop(if miRNA) --                      C  UA        C            A    -       UC     --      AACCCUAA
  AACCCUUGGGUAAACCCUGAAC CU  GAUAAAUC UAAACUCUAAAU AAAA CACUAAA  CUAAA  ACUCUA        A
  |||||||||||||||||||||| ||  |||||||| |||||||||||| |||| |||||||  |||||  ||||||        U
  UUGGGAACCCAUUUGGGAUUUG GA  CUAUUUAG AUUUGAGAUUUA UUUU GUGAUUU  GAUUU  UGAGAU        C
AU                      A  UC        A            G    A       GU     UG      CCCAAAUC
Stem-loop sequence AACCCUUGGGUAAACCCUGAACCCUUAGAUAAAUCCUAAACUCUAAAUAAAAACACUAAAUCCUAAAACUCUAAACCCUAAAUCCUAAACCCUAGAGUGUUUUAGUGUUUAGUGAUUUUGAUUUAGAGUUUAAGAUUUAUCCUAGAGUUUAGGGUUUACCCAAGGGUUUA