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BaseInfo

ncRNA ID	novel_bna_miR249
Species	Brassica napus
Class	miRNA
Genome position	ChrA4:24500032-24500079 [+]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR527233
Length	22
Mature sequence(if miRNA)	27 - AUUCCGACGACAUACCGACGAC - 48
Stem-loop(if miRNA)	--CU                   A     UCGGUAUGUCGUCGGAAUA C     |||||||||||||||||||     AGCCAUACAGCAGCCUUAU G CAGC                   C
Stem-loop sequence	CUUCGGUAUGUCGUCGGAAUAACGCUAUUCCGACGACAUACCGACGAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013855723.1	ncRNA:22   CAGCAGCCAUACAGCAGCCUUA   1   *||||||||||||||||||||| targets:1319   UUCGUCGGUAUGUCGUCGGAAU   1340 Target Full Sequence	0.0	PREDICTED: Brassica napus uncharacterized LOC106415100 (LOC106415100), mRNA	uncharacterized LOC106415100(LOC106415100)	coding protein	psRNATarget
XM_013815065.1	ncRNA:22   CAGCAGCCAUACAGCAGCCUUA   1   *|||||||*||*|||||||||| targets:1319   UUCGUCGGAAUUUCGUCGGAAU   1340 Target Full Sequence	2.5	PREDICTED: Brassica napus uncharacterized LOC106375204 (LOC106375204), mRNA	uncharacterized LOC106375204(LOC106375204)	coding protein	psRNATarget
XM_013828941.1	ncRNA:22   CAGCAGCCAUACAGCAGCCUUA   1   *|||||||*||*|||||||||| targets:1319   UUCGUCGGAAUUUCGUCGGAAU   1340 Target Full Sequence	2.5	PREDICTED: Brassica napus uncharacterized LOC106388794 (LOC106388794), mRNA	uncharacterized LOC106388794(LOC106388794)	coding protein	psRNATarget
XM_013841268.1	ncRNA:22   CAGCAGCCAUACAGCAGCCUUA   1   *|||||||*||*|||||||||| targets:1319   UUCGUCGGAAUUUCGUCGGAAU   1340 Target Full Sequence	2.5	PREDICTED: Brassica napus uncharacterized LOC106400872 (LOC106400872), mRNA	uncharacterized LOC106400872(LOC106400872)	coding protein	psRNATarget
XM_013820163.1	ncRNA:22   CAGCAGCCAUACAGCAGCCUUA   1   *|||||||*||*|||||||||| targets:1319   UUCGUCGGAAUUUCGUCGGAAU   1340 Target Full Sequence	2.5	PREDICTED: Brassica napus uncharacterized LOC106380410 (LOC106380410), mRNA	uncharacterized LOC106380410(LOC106380410)	coding protein	psRNATarget
XM_013830859.1	ncRNA:22   CAGCAGCCAUACAGCAGCCUUA   1   *|||||||*||*|||||||||| targets:1319   UUCGUCGGAAUUUCGUCGGAAU   1340 Target Full Sequence	2.5	PREDICTED: Brassica napus uncharacterized LOC106390405 (LOC106390405), mRNA	uncharacterized LOC106390405(LOC106390405)	coding protein	psRNATarget