ncRNA ID | novel_bna_miR246 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA3:35276665-35276740 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR527233 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AAACAUAUAAUAUUAGGAGAC - 21 |
Stem-loop(if miRNA) |
--                          GAGUCUU    U   AAACAUAUAAUAUUAGGAGACCCAUA       AGGU A   ||||||||||||||||||||||||||       |||| A   UUUGUAUAUUAUAAUCCUCUGGGUAU       UCUA A AG                          -----AU    C |
Stem-loop sequence | AAACAUAUAAUAUUAGGAGACCCAUAGAGUCUUAGGUUAAACAUCUUAUAUGGGUCUCCUAAUAUUAUAUGUUUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013836857.1 |
|
2.5 | PREDICTED: Brassica napus uncharacterized LOC106396461 (LOC106396461), mRNA | uncharacterized LOC106396461(BNAC01G18140D) | coding protein | psRNATarget |