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BaseInfo

ncRNA ID novel_bna_miR231
Species Brassica napus
Class miRNA
Genome position ChrC3:26531692-26531872 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR527233
Length 24
Mature sequence(if miRNA) 1 - AUCCAAGGGUUUAGGGUUUAGGGA - 24
Stem-loop(if miRNA) --                          CUUUGGAUAAA   U           C     CAGCAA             CA   G      G      GUU
  CCUAAACCCUAAACUCUUGGAUAAAU           UCU AAAUUCUAAAU AAAAA      ACACUAAAACACU  AGG CUUAGG UUUAGG   U
  ||||||||||||||||||||||||||           ||| ||||||||||| |||||      |||||||||||||  ||| |||||| ||||||
  GGAUUUGGGAUUUGGGAACCUAUUUA           AGA UUUGAGAUUUA UUUUU      UGUGAUUUUGUGA  UUU GGAUUU GGAUUU   A
AG                          -----------   -           -     ------             --   G      G      AGG
Stem-loop sequence CCUAAACCCUAAACUCUUGGAUAAAUCUUUGGAUAAAUCUUAAAUUCUAAAUCAAAAACAGCAAACACUAAAACACUCAAGGGCUUAGGGUUUAGGGUUUAGGAUUUAGGGUUUAGGGUUUAGUGUUUUAGUGUUUUUUAUUUAGAGUUUAGAAUUUAUCCAAGGGUUUAGGGUUUAGGGA