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BaseInfo

ncRNA ID novel_bna_miR228
Species Brassica napus
Class miRNA
Genome position ChrC3:51940045-51940205 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR527233
Length 21
Mature sequence(if miRNA) 141 - GGACAUGGAUACCUUAUACAC - 161
Stem-loop(if miRNA) --           C    U   --CU      -  ----A   GGACACCUUAUACAAUAGUUGUGGACAUGAACACCUUAACA
  GGACAUGGAUA CUUA ACA    AGUUGU GG     CAU                                         C
  ||||||||||| |||| |||    |||||| ||     |||                                         G
  CCUGUACCUGU GAAU UGU    UCAGCA CC     UGG                                         A
CA           A    -   ACUU      A  AACUA   AUAUUCCACAGGUACAGGUGUUGAUCACAUAUUGAGAUAAU
Stem-loop sequence GGACAUGGAUACCUUAUACACUAGUUGUGGACAUGGACACCUUAUACAAUAGUUGUGGACAUGAACACCUUAACACGAUAAUAGAGUUAUACACUAGUUGUGGACAUGGACACCUUAUAGGUAUCAACCAACGACUUUCAUGUUAAGAUGUCCAUGUCCAC