ncRNA ID | novel_bna_miR228 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC3:51940045-51940205 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR527233 |
Length | 21 |
Mature sequence(if miRNA) | 141 - GGACAUGGAUACCUUAUACAC - 161 |
Stem-loop(if miRNA) |
--           C    U   --CU      -  ----A   GGACACCUUAUACAAUAGUUGUGGACAUGAACACCUUAACA   GGACAUGGAUA CUUA ACA    AGUUGU GG     CAU                                         C   ||||||||||| |||| |||    |||||| ||     |||                                         G   CCUGUACCUGU GAAU UGU    UCAGCA CC     UGG                                         A CA           A    -   ACUU      A  AACUA   AUAUUCCACAGGUACAGGUGUUGAUCACAUAUUGAGAUAAU |
Stem-loop sequence | GGACAUGGAUACCUUAUACACUAGUUGUGGACAUGGACACCUUAUACAAUAGUUGUGGACAUGAACACCUUAACACGAUAAUAGAGUUAUACACUAGUUGUGGACAUGGACACCUUAUAGGUAUCAACCAACGACUUUCAUGUUAAGAUGUCCAUGUCCAC |