| ncRNA ID | novel_bna_miR227 |
| Species | Brassica napus |
| Class | miRNA |
| Genome position | ChrC3:53460624-53460801 [-] |
| Reference genome | Brassica_napus_assembly_v1.0 |
| Source | SRR527233 |
| Length | 21 |
| Mature sequence(if miRNA) | 1 - CAUUGGAGCAUUUUCAGCUAU - 21 |
| Stem-loop(if miRNA) |
-- G U -GC C A - - A U A -CUA A AG UGAAAAUGCUCCAAUGUAUG CU AUAAUAGAGUU CUCUAUUU UAG GAGAAA AUAUAG GAAA G UAUUU CCUCUA A || |||||||||||||||||||| || ||||||||||| |||||||| ||| |||||| |||||| |||| | ||||| |||||| UC ACUUUUACGAGGUUACAUAC GA UAUUAUCUCAA GAGAUAAA AUC CUUUUU UAUGUC CUUU C AUGAA GGAGAU U UA G - AGA U - U A - - A AAAC A |
| Stem-loop sequence | AGGUGAAAAUGCUCCAAUGUAUGUCUGCAUAAUAGAGUUCCUCUAUUUAUAGGAGAAAAUAUAGAGAAAUGAUAUUUCUACCUCUAAAUAUAGAGGCAAAAAGUAACUUUCCUGUAUAUUUUUCUCUAAAAUAGAGUAACUCUAUUAUAGAAGCAUACAUUGGAGCAUUUUCAGCUAU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_013871577.1 |
|
2.5 | PREDICTED: Brassica napus aquaporin NIP6-1 (LOC106430774), mRNA | aquaporin NIP6-1(LOC106430774) | coding protein | psRNATarget | |||||||||
| XM_013794870.1 |
|
2.5 | PREDICTED: Brassica napus aquaporin NIP6-1-like (LOC106354827), mRNA | aquaporin NIP6-1-like(LOC106354827) | coding protein | psRNATarget |