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BaseInfo

ncRNA ID novel_bna_miR221
Species Brassica napus
Class miRNA
Genome position ChrC6:3741485-3741596 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363495
Length 24
Mature sequence(if miRNA) 1 - AAUAUAUAAAGGGUUCGGACCAAU - 24
Stem-loop(if miRNA) --               C   C        -CAUGU      C GA    UUA   G
  AAUAUAUAAAGGGUU GGA CAAUCUAC      UAGAUU G  UUUA   UGG C
  ||||||||||||||| ||| ||||||||      |||||| |  ||||   |||
  UUAUAUAUUUUCUAA CCU GUUAGGUG      GUUUAA C  AAAU   ACC U
CA               U   A        ACUAGU      A -A    UCA   U
Stem-loop sequence AAUAUAUAAAGGGUUCGGACCAAUCUACCAUGUUAGAUUCGGAUUUAUUAUGGGCUUCCAACUUAAAACAAAUUUGUGAUCAGUGGAUUGAUCCUAAUCUUUUAUAUAUUAC