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BaseInfo

ncRNA ID	novel_bna_miR202
Species	Brassica napus
Class	miRNA
Genome position	ChrA4:39998416-39998517 [+]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR527232;SRR527233
Length	21
Mature sequence(if miRNA)	1 - AGUUCUAAUAUUCAUUUACAU - 21
Stem-loop(if miRNA)	--                       ----------      CUA     --U    CA   AGUUCUAAUAUUCAUUUACAUAA          AGGAAU   UAGAU   GUGG  A   |||||||||||||||||||||||          ||||||   |||||   ||||   UCAAGAUUAUAAGUAAAUGUGUU          UUUUUA   AUCUA   UACC  A UC                       AAUUAAUCUA      --A     UUU    AU
Stem-loop sequence	AGUUCUAAUAUUCAUUUACAUAAAGGAAUCUAUAGAUUGUGGCAAAUACCAUUUUAUCUAAAUUUUUAUCUAAUUAAUUGUGUAAAUGAAUAUUAGAACUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013866153.1	ncRNA:21   UACAUUUACUUAUAAUCUUGA   1   =*||=||*||||||||||||| targets:3613   GGGUGAAGGAAUAUUAGAACU   3633 Target Full Sequence	2.0	PREDICTED: Brassica napus histidine kinase 3-like (LOC106425428), transcript variant X1, mRNA	histidine kinase 3-like(LOC106425428)	coding protein	psRNATarget
XM_013866155.1	ncRNA:21   UACAUUUACUUAUAAUCUUGA   1   =*||=||*||||||||||||| targets:3613   GGGUGAAGGAAUAUUAGAACU   3633 Target Full Sequence	2.0	PREDICTED: Brassica napus histidine kinase 3-like (LOC106425428), transcript variant X3, mRNA	histidine kinase 3-like(LOC106425428)	coding protein	psRNATarget
XM_013866154.1	ncRNA:21   UACAUUUACUUAUAAUCUUGA   1   =*||=||*||||||||||||| targets:3613   GGGUGAAGGAAUAUUAGAACU   3633 Target Full Sequence	2.0	PREDICTED: Brassica napus histidine kinase 3-like (LOC106425428), transcript variant X2, mRNA	histidine kinase 3-like(LOC106425428)	coding protein	psRNATarget