ncRNA ID | novel_bna_miR201 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA3:16351464-16351644 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR527232 |
Length | 21 |
Mature sequence(if miRNA) | 161 - GGAGAUUCUUUCAGUCCAAUC - 181 |
Stem-loop(if miRNA) |
--    A              U        GAAC      A  GU          G   AC    C  UC  AA   CG     AA    GAC   GGAG UUCUUUCAGUCCAA CAUGGAUA    AAGAAG GA  AGAAAUAUCU CCG  UCAU CA  CA  CAC  GUGGU  AAAA   A   |||| |||||||||||||| ||||||||    |||||| ||  |||||||||| |||  |||| ||  ||  |||  |||||  ||||   A   CCUC AGGGAAGUCAGGUU GUGUCUAU    UUCUUC CU  UUUUUGUAGA GGC  AGUA GU  GU  GUG  CACCG  UUUU   G UU    G              U        ----      -  AC          G   GU    A  GU  CA   -A     GA    AAA |
Stem-loop sequence | GGAGAUUCUUUCAGUCCAAUCAUGGAUAGAACAAGAAGAGAGUAGAAAUAUCUGCCGACUCAUCCAUCCAAACACCGGUGGUAAAAAAGACAAGAAAUUUUAGGCCACAGUGACUGUGUGAAUGAUGCGGGAGAUGUUUUUCAUCCUUCUUUAUCUGUGUUUGGACUGAAGGGAGCUCCUU |