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BaseInfo

ncRNA ID novel_bna_miR200
Species Brassica napus
Class miRNA
Genome position ChrA6:41286059-41286107 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363495
Length 21
Mature sequence(if miRNA) 29 - UAUGUGUAUGUAGUUGUGGGA - 49
Stem-loop(if miRNA) ------GUA                U
         UAUAUAUAUAUAUAUA A
         |||||||||||||||| U
         AUGUAUGUGUAUAUAU A
AGGGUGUUG                U
Stem-loop sequence GUAUAUAUAUAUAUAUAUAUAUAUUAUAUAUGUGUAUGUAGUUGUGGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013799925.1
ncRNA:21   AGGGUGUUGAUGUAUGUGUAU   1
  *=*|||||*||||||||||||
targets:75   AUACACAAAUACAUACACAUA   95

2.5 PREDICTED: Brassica napus TMV resistance protein N-like (LOC106360344), mRNA TMV resistance protein N-like(LOC106360344) coding protein psRNATarget