ncRNA ID | novel_bna_miR200 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA6:41286059-41286107 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR1363495 |
Length | 21 |
Mature sequence(if miRNA) | 29 - UAUGUGUAUGUAGUUGUGGGA - 49 |
Stem-loop(if miRNA) |
------GUA                U          UAUAUAUAUAUAUAUA A          |||||||||||||||| U          AUGUAUGUGUAUAUAU A AGGGUGUUG                U |
Stem-loop sequence | GUAUAUAUAUAUAUAUAUAUAUAUUAUAUAUGUGUAUGUAGUUGUGGGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013799925.1 |
|
2.5 | PREDICTED: Brassica napus TMV resistance protein N-like (LOC106360344), mRNA | TMV resistance protein N-like(LOC106360344) | coding protein | psRNATarget |