ncRNA ID | ath-miR5649a |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | chr1:21360151-21360251 [+] |
Reference genome | TAIR10 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 73 - AUUGAAUAUGUUGGUUACUAU - 93 |
Stem-loop(if miRNA) |
U                                           AAAAU  UCAUAUUAUAGUAACCAACAUAUUCAAUACUUUCAAAUGAAGA     A  |||||||||||||||||||||||||||||||||||||||||||     A  AGUAUAAUAUCAUUGGUUGUAUAAGUUAUGAAAGUUUACUUCU     U A                                           ACGGU |
Stem-loop sequence | UUCAUAUUAUAGUAACCAACAUAUUCAAUACUUUCAAAUGAAGAAAAAUAAUUGGCAUCUUCAUUUGAAAGUAUUGAAUAUGUUGGUUACUAUAAUAUGAA |
1 | PMID:21940835
"High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis"; Breakfield NW, Corcoran DL, Petricka JJ, Shen J, Sae-Seaw J, Rubio-Somoza I, Weigel D, Ohler U, Benfey PN; Genome Res. 22:163-176(2012). |