ncRNA ID | novel_bna_miR195 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA2:177907-177986 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR527232;SRR527234 |
Length | 21 |
Mature sequence(if miRNA) | 60 - AUACUCUAUAUUUUACUCUAU - 80 |
Stem-loop(if miRNA) |
--                  A  AUA           CAA   AGAGUGAAAUAUAGAGUA UC   UUUUUUUACUC   A   |||||||||||||||||| ||   |||||||||||   UCUCAUUUUAUAUCUCAU AG   AAAAAAGUGAG   U UA                  A  AAC           AUA |
Stem-loop sequence | AGAGUGAAAUAUAGAGUAAUCAUAUUUUUUUACUCCAAAUAUAGAGUGAAAAAACAAGAAUACUCUAUAUUUUACUCUAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013890437.1 |
|
2.5 | PREDICTED: Brassica napus putative F-box protein At1g47790 (LOC106448571), mRNA | putative F-box protein At1g47790(LOC106448571) | coding protein | psRNATarget |