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BaseInfo

ncRNA ID novel_bna_miR195
Species Brassica napus
Class miRNA
Genome position ChrA2:177907-177986 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR527232;SRR527234
Length 21
Mature sequence(if miRNA) 60 - AUACUCUAUAUUUUACUCUAU - 80
Stem-loop(if miRNA) --                  A  AUA           CAA
  AGAGUGAAAUAUAGAGUA UC   UUUUUUUACUC   A
  |||||||||||||||||| ||   |||||||||||
  UCUCAUUUUAUAUCUCAU AG   AAAAAAGUGAG   U
UA                  A  AAC           AUA
Stem-loop sequence AGAGUGAAAUAUAGAGUAAUCAUAUUUUUUUACUCCAAAUAUAGAGUGAAAAAACAAGAAUACUCUAUAUUUUACUCUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013890437.1
ncRNA:21   UAUCUCAUUUUAUAUCUCAUA   1
  ||||||*||||||||||*|||
targets:883   AUAGAGAAAAAUAUAGAAUAU   903

2.5 PREDICTED: Brassica napus putative F-box protein At1g47790 (LOC106448571), mRNA putative F-box protein At1g47790(LOC106448571) coding protein psRNATarget