ncRNA ID | novel_bna_miR194 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA10:12243589-12243702 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR527232 |
Length | 21 |
Mature sequence(if miRNA) | 94 - AUACUCUAUAUUUUACUCUAU - 114 |
Stem-loop(if miRNA) |
----AUA                 UU                       GAACCAUUA        CUCUAUAUUUUACUCUA  AUAGAGUAAUUCUAUUAUAGAGU         G        |||||||||||||||||  |||||||||||||||||||||||        GAGAUAUAAAGUGAGAU  UAUCUCAUUGAGAUAAUAUCUCA         A AUUAAAA                 UU                       AUUUAAACG |
Stem-loop sequence | AUACUCUAUAUUUUACUCUAUUAUAGAGUAAUUCUAUUAUAGAGUGAACCAUUAGAGCAAAUUUAACUCUAUAAUAGAGUUACUCUAUUUUAGAGUGAAAUAUAGAGAAAAUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013890437.1 |
|
2.5 | PREDICTED: Brassica napus putative F-box protein At1g47790 (LOC106448571), mRNA | putative F-box protein At1g47790(LOC106448571) | coding protein | psRNATarget |