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BaseInfo

ncRNA ID novel_bna_miR183
Species Brassica napus
Class miRNA
Genome position ChrA9:23987500-23987675 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR527232
Length 19
Mature sequence(if miRNA) 1 - AGAACCUCAGUUAAGAGAC - 19
Stem-loop(if miRNA) --        C   A      ACUAAU   --UU         UU      UUUAUAUU              C    --UUUAUA      A
  CUCUUAGC GGG UUCUUA      GAU    GAUAUUUUU  UGUUUU        UUUUGAUUAAGAAA GGCU        UCUCUU U
  |||||||| ||| ||||||      |||    |||||||||  ||||||        |||||||||||||| ||||        ||||||
  GAGAAUUG CUC AAGAAU      CUA    CUGUAAAAA  ACAAAA        AAAAUUGAUUCUUU UUGA        AGAGAA U
CA        A   C      CAAGGC   UUCU         UC      -----UUU              -    UUUUUGAC      U
Stem-loop sequence CUCUUAGCCGGGAUUCUUAACUAAUGAUUUGAUAUUUUUUUUGUUUUUUUAUAUUUUUUGAUUAAGAAACGGCUUUUAUAUCUCUUAUUUAAGAGACAGUUUUUAGUUUUUCUUAGUUAAAAUUUAAAACACUAAAAAUGUCUCUUAUCCGGAACUAAGAACCUCAGUUAAGAGAC