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BaseInfo

ncRNA ID	novel_bna_miR179
Species	Brassica napus
Class	miRNA
Genome position	ChrA7:2390193-2390339 [+]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR527232
Length	21
Mature sequence(if miRNA)	1 - GGUUUUUAGCAGAAGUUAAGA - 21
Stem-loop(if miRNA)	--          A                                                          GU   GGUUUUUAGC GAAGUUAAGAAACUGUUUCUUAACUUUUAACUAAAAAAGCUAAGAACCGGUUCUUAAA  C   |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  C   UCAAAAAUCG CUUCAAUUCUUUGACAAAGAAUUGAAAAUUGAUUUUUUUGAUUCUUGGCCAAGAAUUU  U UC          C                                                          AU
Stem-loop sequence	GGUUUUUAGCAGAAGUUAAGAAACUGUUUCUUAACUUUUAACUAAAAAAGCUAAGAACCGGUUCUUAAAGUCCUUAUUUAAGAACCGGUUCUUAGUUUUUUUAGUUAAAAGUUAAGAAACAGUUUCUUAACUUCCGCUAAAAACUCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013888792.1	ncRNA:21   AGAAUUGAAGACGAUUUUUGG   1   ||||||||||*|||||||||| targets:1829   UCUUAACUUCCGCUAAAAACC   1849 Target Full Sequence	1.5	PREDICTED: Brassica napus UDP-glycosyltransferase 71B5-like (LOC106446953), mRNA	UDP-glycosyltransferase 71B5-like(LOC106446953)	coding protein	psRNATarget
XM_013817285.1	ncRNA:21   AGAAUUGAAGACGAUUUUUGG   1   ||||||||||*|||||||||| targets:2875   UCUUAACUUCCGCUAAAAACC   2895 Target Full Sequence	1.5	PREDICTED: Brassica napus UDP-glycosyltransferase 71B5-like (LOC106377115), mRNA	UDP-glycosyltransferase 71B5-like(LOC106377115)	coding protein	psRNATarget
XM_013893230.1	ncRNA:21   AGAAUUGAAGACGAUUUUUGG   1   |*|||||||=||||||||||= targets:2413   UGUUAACUUUUGCUAAAAACU   2433 Target Full Sequence	2.5	PREDICTED: Brassica napus homeobox-leucine zipper protein HDG2-like (LOC106451311), mRNA	homeobox-leucine zipper protein HDG2-like(LOC106451311)	coding protein	psRNATarget