ncRNA ID | novel_bna_miR177 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA6:1928511-1928575 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR527232 |
Length | 20 |
Mature sequence(if miRNA) | 46 - AGGCAGUGACGACUCGGAAA - 65 |
Stem-loop(if miRNA) |
--    -    A    --       C   AUAAA   UUUG GUCG UCAU  CUUUUUC AUU     A   |||| |||| ||||  ||||||| |||     A   AGGC CAGC AGUG  GGAAGAG UAG     A AA    U    -    AC       A   AAAAA |
Stem-loop sequence | UUUGGUCGAUCAUCUUUUUCCAUUAUAAAAAAAAAAAGAUAGAGAAGGCAGUGACGACUCGGAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013843652.1 |
|
1.5 | PREDICTED: Brassica napus U6 snRNA phosphodiesterase-like (LOC106402850), transcript variant X2, mRNA | U6 snRNA phosphodiesterase-like(LOC106402850) | coding protein | psRNATarget |