Search result

BaseInfo

ncRNA ID ath-miRf10563-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - GGUCUAAGUGUACGAAUCAA - NA
Stem-loop(if miRNA)      A      U                        --------     UUUUAGUGUACAGAUGUAAGUGUAU
CUUUU ACUGUU GAUUCGUACACUUAGAUCUGUACA        ACACU                         G
||||| |||||| ||||||||||||||||||||||||        |||||
GAAAA UGACAA CUAAGCAUGUGAAUCUGGACAUGU        UCACA                         U
     G      -                        UAUAAAAA     UAUAUAUAUAUAUAUUUAUAUGUGU
Stem-loop sequence CUUUUAACUGUUUGAUUCGUACACUUAGAUCUGUACAACACUUUUUAGUGUACAGAUGUAAGUGUAUGUUGUGUAUAUUUAUAUAUAUAUAUAUACACUAAAAAUAUUGUACAGGUCUAAGUGUACGAAUCAACAGUGAAAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_179830.1
ncRNA:20   AACUAAGCAUGUGAAUCUGG   1
  ||||||||||||||||||==
targets:355   UUGAUUCGUACACUUAGAUU   374

2.5 Arabidopsis thaliana basic helix-loop-helix (bHLH) DNA-binding superfamily protein partial mRNA basic helix-loop-helix (bHLH) DNA-binding superfamily protein(AT2G31215) coding protein psRNATarget