ncRNA ID | novel_bna_miR171 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA4:7557844-7557928 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR527231 |
Length | 18 |
Mature sequence(if miRNA) | 68 - AGAAUCUUGAUGAUGCUG - 85 |
Stem-loop(if miRNA) |
--U    U         AG      UAUUCUUU      U  UC    CAUC UCAAGAUUC  AAAUCA        GAUGGG UC  C    |||| |||||||||  ||||||        |||||| ||    GUAG AGUUCUAAG  UUUGGU        CUACCC AG  U GUC    U         AG      ---UUCUU      U  UC |
Stem-loop sequence | UCAUCUUCAAGAUUCAGAAAUCAUAUUCUUUGAUGGGUUCUCCUCUGAUCCCAUCUUCUUUGGUUUGAGAAUCUUGAUGAUGCUG |