ncRNA ID | novel_bna_miR169 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA4:31093939-31094100 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR527231 |
Length | 23 |
Mature sequence(if miRNA) | 1 - UUGCUCUAAUGGUUCACUCUAUA - 23 |
Stem-loop(if miRNA) |
--              C                 UA       AA                                   U   UUGCUCUAAUGGUU ACUCUAUAAUAGAGUUA  CUAUAAU  AGUGAAAUAUAGAGGAAUGUUGUUUUUUUACUCUA A   |||||||||||||| |||||||||||||||||  |||||||  |||||||||||||||||||||||||||||||||||   AACGAGAUUACCAA UGAGAUAUUAUCUCAAU  GAUAUUA  UCACUUUAUAUCUCUUUACAACAAAAAAAUGAGGU U UA              A                 UA       CC                                   U |
Stem-loop sequence | UUGCUCUAAUGGUUCACUCUAUAAUAGAGUUAUACUAUAAUAAAGUGAAAUAUAGAGGAAUGUUGUUUUUUUACUCUAUAUUUGGAGUAAAAAAACAACAUUUCUCUAUAUUUCACUCCAUUAUAGAUUAACUCUAUUAUAGAGUAAACCAUUAGAGCAAAU |