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BaseInfo

ncRNA ID novel_bna_miR169
Species Brassica napus
Class miRNA
Genome position ChrA4:31093939-31094100 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR527231
Length 23
Mature sequence(if miRNA) 1 - UUGCUCUAAUGGUUCACUCUAUA - 23
Stem-loop(if miRNA) --              C                 UA       AA                                   U
  UUGCUCUAAUGGUU ACUCUAUAAUAGAGUUA  CUAUAAU  AGUGAAAUAUAGAGGAAUGUUGUUUUUUUACUCUA A
  |||||||||||||| |||||||||||||||||  |||||||  |||||||||||||||||||||||||||||||||||
  AACGAGAUUACCAA UGAGAUAUUAUCUCAAU  GAUAUUA  UCACUUUAUAUCUCUUUACAACAAAAAAAUGAGGU U
UA              A                 UA       CC                                   U
Stem-loop sequence UUGCUCUAAUGGUUCACUCUAUAAUAGAGUUAUACUAUAAUAAAGUGAAAUAUAGAGGAAUGUUGUUUUUUUACUCUAUAUUUGGAGUAAAAAAACAACAUUUCUCUAUAUUUCACUCCAUUAUAGAUUAACUCUAUUAUAGAGUAAACCAUUAGAGCAAAU