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BaseInfo

ncRNA ID novel_bna_miR167
Species Brassica napus
Class miRNA
Genome position ChrA3:7571600-7571683 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR527231;SRR537600;SRR537609;SRR527228
Length 21
Mature sequence(if miRNA) 1 - AAGCUCAGGAGGGAUAGCGCC - 21
Stem-loop(if miRNA) --A         G           UGUCUCACCA    UAUGA
   AGCUCAGGA GGAUAGCGCCA          GUAC     A
   ||||||||| |||||||||||          ||||
   UUGAGUCCU CCUAUCGCGGU          UAUG     A
AUC         A           --UAUAUCUA    UUUGU
Stem-loop sequence AAGCUCAGGAGGGAUAGCGCCAUGUCUCACCAGUACUAUGAAAUGUUUGUAUAUCUAUAUUGGCGCUAUCCAUCCUGAGUUCUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013810883.1
ncRNA:21   CCGCGAUAGGGAGGACUCGAA   1
  **|||||*|||||||||*|||
targets:1595   AACGCUAACCCUCCUGAUCUU   1615

2.5 PREDICTED: Brassica napus cytochrome P450 78A6-like (LOC106370887), transcript variant X3, mRNA cytochrome P450 78A6-like(LOC106370887) coding protein psRNATarget
XM_013842905.1
ncRNA:21   CCGCGAUAGGGAGGACUCGAA   1
  **|||||*|||||||||*|||
targets:1567   AACGCUAACCCUCCUGAUCUU   1587

2.5 PREDICTED: Brassica napus cytochrome P450 78A6-like (LOC106402213), mRNA cytochrome P450 78A6-like(LOC106402213) coding protein psRNATarget
XM_013841739.1
ncRNA:21   CCGCGAUAGGGAGGACUCGAA   1
  **|||||*|||||||||*|||
targets:1567   AACGCUAACCCUCCUGAUCUU   1587

2.5 PREDICTED: Brassica napus cytochrome P450 78A6-like (LOC106401261), mRNA cytochrome P450 78A6-like(LOC106401261) coding protein psRNATarget
XM_013810884.1
ncRNA:21   CCGCGAUAGGGAGGACUCGAA   1
  **|||||*|||||||||*|||
targets:1595   AACGCUAACCCUCCUGAUCUU   1615

2.5 PREDICTED: Brassica napus cytochrome P450 78A6-like (LOC106370887), transcript variant X4, mRNA cytochrome P450 78A6-like(LOC106370887) coding protein psRNATarget
XM_013810882.1
ncRNA:21   CCGCGAUAGGGAGGACUCGAA   1
  **|||||*|||||||||*|||
targets:1595   AACGCUAACCCUCCUGAUCUU   1615

2.5 PREDICTED: Brassica napus cytochrome P450 78A6-like (LOC106370887), transcript variant X2, mRNA cytochrome P450 78A6-like(LOC106370887) coding protein psRNATarget
XM_013810879.1
ncRNA:21   CCGCGAUAGGGAGGACUCGAA   1
  **|||||*|||||||||*|||
targets:1595   AACGCUAACCCUCCUGAUCUU   1615

2.5 PREDICTED: Brassica napus cytochrome P450 78A6-like (LOC106370887), transcript variant X1, mRNA cytochrome P450 78A6-like(LOC106370887) coding protein psRNATarget