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BaseInfo

ncRNA ID	ath-miRf10562-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - CCUUUGGCACCUUUGUUGGC - NA
Stem-loop(if miRNA)	UCAA        -CU         -       C -----    -C   UC CGUCGU    GCCAACAG   UGCUAGAGG ACCAGAG C     AGCU  GAG  U ||||||    ||||||||   ||||||||| ||||||| |     ||||  |||  G GCAGCA    CGGUUGUU   ACGGUUUCC UGGUCUC G     UCGA  CUC  G       UCUG        UCC         C       A CACCC    UU   UC
Stem-loop sequence	CGUCGUUCAAGCCAACAGCUUGCUAGAGGACCAGAGCCAGCUCGAGUCUGGCUCUCUUAGCUCCCACGACUCUGGUCCCUUUGGCACCUUUGUUGGCGUCUACGACG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY081552.1	ncRNA:20   CGGUUGUUUCCACGGUUUCC   1   |*|||*|||||||||||||| targets:460   GGCAAAAAAGGUGCCAAAGG   479 Target Full Sequence	2.0	Arabidopsis thaliana similar to Pto kinase interactor 1 (At1g48210) mRNA, complete cds	NA	coding protein	psRNATarget
NM_001084219.1	ncRNA:20   CGGUUGUUUCCACGGUUUCC   1   |*|||*|||||||||||||| targets:525   GGCAAAAAAGGUGCCAAAGG   544 Target Full Sequence	2.0	Arabidopsis thaliana Protein kinase superfamily protein mRNA	Protein kinase superfamily protein(AT1G48210)	coding protein	psRNATarget
BX814583.1	ncRNA:20   CGGUUGUUUCCACGGUUUCC   1   |*|||*|||||||||||||| targets:594   GGCAAAAAAGGUGCCAAAGG   613 Target Full Sequence	2.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB82ZE02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BX815085.1	ncRNA:20   CGGUUGUUUCCACGGUUUCC   1   |*|||*|||||||||||||| targets:591   GGCAAAAAAGGUGCCAAAGG   610 Target Full Sequence	2.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS31ZA07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AY054678.1	ncRNA:20   CGGUUGUUUCCACGGUUUCC   1   |*|||*|||||||||||||| targets:613   GGCAAAAAAGGUGCCAAAGG   632 Target Full Sequence	2.0	Arabidopsis thaliana similar to Pto kinase interactor 1 gb|AAC61805.1 (At1g48210; F21D18.6) mRNA, complete cds	NA	coding protein	psRNATarget
NM_103718.5	ncRNA:20   CGGUUGUUUCCACGGUUUCC   1   |*|||*|||||||||||||| targets:647   GGCAAAAAAGGUGCCAAAGG   666 Target Full Sequence	2.0	Arabidopsis thaliana Protein kinase superfamily protein mRNA	Protein kinase superfamily protein(AT1G48210)	coding protein	psRNATarget
NM_001333313.1	ncRNA:20   CGGUUGUUUCCACGGUUUCC   1   |*|||*|||||||||||||| targets:525   GGCAAAAAAGGUGCCAAAGG   544 Target Full Sequence	2.0	Arabidopsis thaliana Protein kinase superfamily protein mRNA	Protein kinase superfamily protein(AT1G48210)	coding protein	psRNATarget
NM_001333312.1	ncRNA:20   CGGUUGUUUCCACGGUUUCC   1   |*|||*|||||||||||||| targets:728   GGCAAAAAAGGUGCCAAAGG   747 Target Full Sequence	2.0	Arabidopsis thaliana Protein kinase superfamily protein mRNA	Protein kinase superfamily protein(AT1G48210)	coding protein	psRNATarget
NM_001333311.1	ncRNA:20   CGGUUGUUUCCACGGUUUCC   1   |*|||*|||||||||||||| targets:525   GGCAAAAAAGGUGCCAAAGG   544 Target Full Sequence	2.0	Arabidopsis thaliana Protein kinase superfamily protein mRNA	Protein kinase superfamily protein(AT1G48210)	coding protein	psRNATarget
NM_001333309.1	ncRNA:20   CGGUUGUUUCCACGGUUUCC   1   |*|||*|||||||||||||| targets:1146   GGCAAAAAAGGUGCCAAAGG   1165 Target Full Sequence	2.0	Arabidopsis thaliana Protein kinase superfamily protein mRNA	Protein kinase superfamily protein(AT1G48210)	coding protein	psRNATarget
NM_001333310.1	ncRNA:20   CGGUUGUUUCCACGGUUUCC   1   |*|||*|||||||||||||| targets:1281   GGCAAAAAAGGUGCCAAAGG   1300 Target Full Sequence	2.0	Arabidopsis thaliana Protein kinase superfamily protein mRNA	Protein kinase superfamily protein(AT1G48210)	coding protein	psRNATarget
BT005007.1	ncRNA:20   CGGUUGUUUCCACGGUUUCC   1   |||||*|||||||*|||||| targets:79   GCCAAGAAAGGUGGCAAAGG   98 Target Full Sequence	2.5	Arabidopsis thaliana clone U20678 unknown protein (At3g01740) mRNA, complete cds	NA	coding protein	psRNATarget
BX825140.1	ncRNA:20   CGGUUGUUUCCACGGUUUCC   1   |||||*|||||||*|||||| targets:106   GCCAAGAAAGGUGGCAAAGG   125 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL15ZC10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BT003920.1	ncRNA:20   CGGUUGUUUCCACGGUUUCC   1   |||||*|||||||*|||||| targets:141   GCCAAGAAAGGUGGCAAAGG   160 Target Full Sequence	2.5	Arabidopsis thaliana clone RAFL15-18-N15 (R20678) unknown protein (At3g01740) mRNA, complete cds	NA	coding protein	psRNATarget
BX825362.1	ncRNA:20   CGGUUGUUUCCACGGUUUCC   1   |||||*|||||||*|||||| targets:158   GCCAAGAAAGGUGGCAAAGG   177 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL32ZB10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AY086215.1	ncRNA:20   CGGUUGUUUCCACGGUUUCC   1   |||||*|||||||*|||||| targets:170   GCCAAGAAAGGUGGCAAAGG   189 Target Full Sequence	2.5	Arabidopsis thaliana clone 22512 mRNA, complete sequence	NA	coding protein	psRNATarget
NM_111040.4	ncRNA:20   CGGUUGUUUCCACGGUUUCC   1   |||||*|||||||*|||||| targets:273   GCCAAGAAAGGUGGCAAAGG   292 Target Full Sequence	2.5	Arabidopsis thaliana Mitochondrial ribosomal protein L37 mRNA	Mitochondrial ribosomal protein L37(AT3G01740)	coding protein	psRNATarget