| ncRNA ID | novel_bna_miR158 |
| Species | Brassica napus |
| Class | miRNA |
| Genome position | ChrA6:3683399-3683615 [+] |
| Reference genome | Brassica_napus_assembly_v1.0 |
| Source | SRR1363495;SRR1363496;SRR2015555 |
| Length | 24 |
| Mature sequence(if miRNA) | 194 - AGAAUAUGUAACUUUAAGGAACGG - 217 |
| Stem-loop(if miRNA) |
-- UUUUUCACAC UAAAACACAUUAAA A UUC A -- --A A CU AA GUUCCUUAAAGUUACAUAUUCUAGA GUUUUAA UUUACAU UUUU CAUA UUUUA AGCUAAU AAA UUCAA AAAGC U ||||||||||||||||||||||||| ||||||| ||||||| |||| |||| ||||| ||||||| ||| ||||| ||||| CAAGGAAUUUCAAUGUAUAAGAUCU CAAAGUU AAAUGUA AGGA GUAU AAAAU UUGAUUA UUU AAGUU UUUUG U GG UUUUUUUAAA --UUUCUAGAUAAA A UAC - AA AUG G -- AA |
| Stem-loop sequence | GUUCCUUAAAGUUACAUAUUCUAGAUUUUUCACACGUUUUAAUAAAACACAUUAAAUUUACAUAUUUUUUCCAUAAUUUUAAGCUAAUAAAAAUUCAACUAAAGCAAUUAAGUUUUUUGAAGUUUGUAAUUAGUUAAUAAAAUAUGCAUAGGAAAUGUAAAAAAUAGAUCUUUUUGAAACAAAUUUUUUUUCUAGAAUAUGUAACUUUAAGGAACGG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_013828629.1 |
|
1.0 | PREDICTED: Brassica napus plant UBX domain-containing protein 10-like (LOC106388539), mRNA | plant UBX domain-containing protein 10-like(LOC106388539) | coding protein | psRNATarget | |||||||||
| XM_013863579.1 |
|
3.0 | PREDICTED: Brassica napus calcium-binding mitochondrial carrier protein SCaMC-1-like (LOC106422784), mRNA | calcium-binding mitochondrial carrier protein SCaMC-1-like(LOC106422784) | coding protein | psRNATarget |