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BaseInfo

ncRNA ID	novel_bna_miR148
Species	Brassica napus
Class	miRNA
Genome position	ChrC5:18990061-18990133 [-]
Reference genome	Brassica_napus_assembly_v1.0
Source	SRR527231;SRR527236;SRR1363495;SRR1363496;SRR2015555;SRR527229
Length	21
Mature sequence(if miRNA)	1 - ACGGUAUCUCUCCUACGUAGC - 21
Stem-loop(if miRNA)	--UU  C          G  C     -     --U  U     CG AGGAGAGAUA CG CAUCA CUUCU   CU A     || |||||||||| || ||||| |||||   ||     GC UCCUCUCUAU GC GUGGU GAAGA   GA A CGAU  A          G  A     A     UUU  G
Stem-loop sequence	UUCGCAGGAGAGAUAGCGCCAUCACUUCUUCUUAAGAGUUUAGAAGAUGGUGACGGUAUCUCUCCUACGUAGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013785864.1	ncRNA:21   CGAUGCAUCCUCUCUAUGGCA   1   *=|||*||||||||||||||* targets:1931   AUUACUUAGGAGAGAUACCGG   1951 Target Full Sequence	2.0	PREDICTED: Brassica napus probable LRR receptor-like serine/threonine-protein kinase At1g51880 (LOC106346507), transcript variant X3, mRNA	probable LRR receptor-like serine/threonine-protein kinase At1g51880(LOC106346507)	coding protein	psRNATarget
XM_013785862.1	ncRNA:21   CGAUGCAUCCUCUCUAUGGCA   1   *=|||*||||||||||||||* targets:1996   AUUACUUAGGAGAGAUACCGG   2016 Target Full Sequence	2.0	PREDICTED: Brassica napus probable LRR receptor-like serine/threonine-protein kinase At1g51880 (LOC106346507), transcript variant X1, mRNA	probable LRR receptor-like serine/threonine-protein kinase At1g51880(LOC106346507)	coding protein	psRNATarget
XM_013785863.1	ncRNA:21   CGAUGCAUCCUCUCUAUGGCA   1   *=|||*||||||||||||||* targets:2002   AUUACUUAGGAGAGAUACCGG   2022 Target Full Sequence	2.0	PREDICTED: Brassica napus probable LRR receptor-like serine/threonine-protein kinase At1g51880 (LOC106346507), transcript variant X2, mRNA	probable LRR receptor-like serine/threonine-protein kinase At1g51880(LOC106346507)	coding protein	psRNATarget
XM_013888178.1	ncRNA:21   CGAUGCAUCCUCUCUAUGGCA   1   ***|||*|||||||||||||| targets:1865   AAAACGGAGGAGAGAUACCGU   1885 Target Full Sequence	2.0	PREDICTED: Brassica napus histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like (LOC106446446), transcript variant X1, mRNA	histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like(LOC106446446)	coding protein	psRNATarget
XM_013888176.1	ncRNA:21   CGAUGCAUCCUCUCUAUGGCA   1   ***|||*|||||||||||||| targets:1865   AAAACGGAGGAGAGAUACCGU   1885 Target Full Sequence	2.0	PREDICTED: Brassica napus histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like (LOC106446445), transcript variant X1, mRNA	histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like(LOC106446445)	coding protein	psRNATarget
XM_013888179.1	ncRNA:21   CGAUGCAUCCUCUCUAUGGCA   1   ***|||*|||||||||||||| targets:1865   AAAACGGAGGAGAGAUACCGU   1885 Target Full Sequence	2.0	PREDICTED: Brassica napus histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like (LOC106446446), transcript variant X2, mRNA	histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like(LOC106446446)	coding protein	psRNATarget
XM_013832887.1	ncRNA:21   CGAUGCAUCCUCUCUAUGGCA   1   ***|||*|||||||||||||| targets:1923   AGAACGGAGGAGAGAUACCGU   1943 Target Full Sequence	2.0	PREDICTED: Brassica napus histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like (LOC106392112), mRNA	histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like(LOC106392112)	coding protein	psRNATarget
XM_013888177.1	ncRNA:21   CGAUGCAUCCUCUCUAUGGCA   1   ***|||*|||||||||||||| targets:1865   AAAACGGAGGAGAGAUACCGU   1885 Target Full Sequence	2.0	PREDICTED: Brassica napus histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like (LOC106446445), transcript variant X2, mRNA	histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like(LOC106446445)	coding protein	psRNATarget