ncRNA ID | novel_bna_miR147 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC4:807999-808189 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR527231;SRR527233;SRR527236 |
Length | 18 |
Mature sequence(if miRNA) | 1 - UUUGGAUUGAAGGGAGCU - 18 |
Stem-loop(if miRNA) |
--         -      A         CA   UUUA    ----------A       --UU   A      UU UU    G UU   -C   U        GA   CUCCCUUCG UCCAAA CGAAGAGGA  AGA    AGGA           AUAGAAA    GAA AUCUAA  G  CAUG A  CCC  UAU AAGUGCUU  A   ||||||||| |||||| |||||||||  |||    ||||           |||||||    ||| ||||||  |  |||| |  |||  ||| ||||||||  U   GAGGGAAGU AGGUUU GCUUCUCUU  UCU    UCCU           UAUCUUU    CUU UAGAUU  C  GUAC U  GGG  AUA UUCACGAG  A UC         U      -         -C   ----    AUAUAUAUGCA       CUCU   C      CU CG    G UU   AA   U        UA |
Stem-loop sequence | CUCCCUUCGUCCAAAACGAAGAGGACAAGAUUUAAGGAAAUAGAAAUUGAAAAUCUAAUUGUUCAUGGAUUCCCCUAUUAAGUGCUUGAAUAAUGAGCACUUUAUAAAGGGUUUGCAUGGCCUCUUAGAUCUUCUCUCUUUCUAUACGUAUAUAUAUCCUUCUCUUCUCUUCGUUUGGAUUGAAGGGAGCU |