ncRNA ID | ath-miRf10560-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 21 |
Mature sequence(if miRNA) | NA - UGCACUUCACUGCAGAAGCUG - NA |
Stem-loop(if miRNA) |
    A  AAA              A          --   A   --A      U  U GCCU AA   GCCAGCUUCUGCAG UGAAGUGCAA  UCG GAG   GAUUUC UC G |||| ||   |||||||||||||| ||||||||||  ||| |||   |||||| || C UGGA UU   CGGUCGAAGACGUC ACUUCACGUU  AGC UUC   CUAAGG GG C     G  --G              -          AC   A   AUG      U  G |
Stem-loop sequence | GCCUAAAAAAGCCAGCUUCUGCAGAUGAAGUGCAAUCGAGAGAGAUUUCUUCUGCCGGGUGGAAUCGUACUUACGACAUUGCACUUCACUGCAGAAGCUGGCGUUGAGGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BX828433.1 |
|
0.0 | Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH8ZA12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) | NA | coding protein | psRNATarget | |||||||||
NM_119349.2 |
|
0.0 | Arabidopsis thaliana PPPDE thiol peptidase family protein partial mRNA | PPPDE thiol peptidase family protein(AT4G31980) | coding protein | psRNATarget |