ncRNA ID | novel_bna_miR136 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrC1:33245697-33245878 [-] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR527231 |
Length | 22 |
Mature sequence(if miRNA) | 161 - UUAACCCGAAGUUCUUAGAGUG - 182 |
Stem-loop(if miRNA) |
--      C AA        AG                    ------------UC                    C       C          GU   UUAACC G  GUUCUUAG  UGGGGUUUUUAGCGGAAGUU              UUAACUUUUAACUAAAAAAA UAAGAAC GGUUCUUAAA  C   |||||| |  ||||||||  ||||||||||||||||||||              |||||||||||||||||||| ||||||| ||||||||||  C   AAUUGG C  CAAGAAUC  ACUUCAAGAAUCGCCUUCAA              AAUUGAAAAUUGAUUUUUUU AUUCUUG CCAAGAAUUU  U CU      - CC        CU                    UAUUUUAACAAAAA                    C       C          AU |
Stem-loop sequence | UUAACCCGAAGUUCUUAGAGUGGGGUUUUUAGCGGAAGUUUCUUAACUUUUAACUAAAAAAACUAAGAACCGGUUCUUAAAGUCCUUAUUUAAGAACCCGUUCUUACUUUUUUUAGUUAAAAGUUAAAAAAACAAUUUUAUAACUUCCGCUAAGAACUUCAUCCUAAGAACCCCGGUUAAUC |