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BaseInfo

ncRNA ID novel_bna_miR136
Species Brassica napus
Class miRNA
Genome position ChrC1:33245697-33245878 [-]
Reference genome Brassica_napus_assembly_v1.0
Source SRR527231
Length 22
Mature sequence(if miRNA) 161 - UUAACCCGAAGUUCUUAGAGUG - 182
Stem-loop(if miRNA) --      C AA        AG                    ------------UC                    C       C          GU
  UUAACC G  GUUCUUAG  UGGGGUUUUUAGCGGAAGUU              UUAACUUUUAACUAAAAAAA UAAGAAC GGUUCUUAAA  C
  |||||| |  ||||||||  ||||||||||||||||||||              |||||||||||||||||||| ||||||| ||||||||||  C
  AAUUGG C  CAAGAAUC  ACUUCAAGAAUCGCCUUCAA              AAUUGAAAAUUGAUUUUUUU AUUCUUG CCAAGAAUUU  U
CU      - CC        CU                    UAUUUUAACAAAAA                    C       C          AU
Stem-loop sequence UUAACCCGAAGUUCUUAGAGUGGGGUUUUUAGCGGAAGUUUCUUAACUUUUAACUAAAAAAACUAAGAACCGGUUCUUAAAGUCCUUAUUUAAGAACCCGUUCUUACUUUUUUUAGUUAAAAGUUAAAAAAACAAUUUUAUAACUUCCGCUAAGAACUUCAUCCUAAGAACCCCGGUUAAUC