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BaseInfo

ncRNA ID novel_bna_miR130
Species Brassica napus
Class miRNA
Genome position ChrA9:24539979-24540058 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR527231;SRR527232;SRR527233;SRR527234
Length 21
Mature sequence(if miRNA) 60 - AUACUCUAUAUUUUACUCUAU - 80
Stem-loop(if miRNA) --            U     A    A           CAA
  AGAGUGAAAUAU GAGUA UCUU UUUUUUUACUC   A
  |||||||||||| ||||| |||| |||||||||||
  UCUCAUUUUAUA CUCAU AGAA AAAAAAGUGAG   U
UA            U     A    C           AUA
Stem-loop sequence AGAGUGAAAUAUUGAGUAAUCUUAUUUUUUUACUCCAAAUAUAGAGUGAAAAAACAAGAAUACUCUAUAUUUUACUCUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013890437.1
ncRNA:21   UAUCUCAUUUUAUAUCUCAUA   1
  ||||||*||||||||||*|||
targets:883   AUAGAGAAAAAUAUAGAAUAU   903

2.5 PREDICTED: Brassica napus putative F-box protein At1g47790 (LOC106448571), mRNA putative F-box protein At1g47790(LOC106448571) coding protein psRNATarget