ncRNA ID | novel_bna_miR118 |
Species | Brassica napus |
Class | miRNA |
Genome position | ChrA10:20585385-20585595 [+] |
Reference genome | Brassica_napus_assembly_v1.0 |
Source | SRR527230 |
Length | 23 |
Mature sequence(if miRNA) | 189 - UUUACCUAAGAGUUUAGGGUUUA - 211 |
Stem-loop(if miRNA) |
--          C     A               U         A         -A     AACACUAAAC              CCC       -      C     C - U   AACUCUAAAC CUUGG UAAACUCUAAACCCU GGAUAAAUC UAAACUCUA  AUAAA          UCUUAAACUCUAAA   UAAAAUC CUAAAC CUAAA C C U   |||||||||| ||||| ||||||||||||||| ||||||||| |||||||||  |||||          ||||||||||||||   ||||||| |||||| ||||| | |   UUGGGAUUUG GAAUC AUUUGGGAUUUGGGA CCUAUUUAG AUUUGAGAU  UAUUU          AGAAUUUGAGAUUU   GUUUUAG GAUUUG GAUUU G G G AU          A     C               U         A         CC     ----------              --A       U      U     U U A |
Stem-loop sequence | AACUCUAAACCCUUGGAUAAACUCUAAACCCUUGGAUAAAUCAUAAACUCUAAAUAAAAACACUAAACUCUUAAACUCUAAACCCUAAAAUCCUAAACCCUAAACCCUUGAGUGUUUUAGUGUUUAGUGAUUUUGAUUUAGAGUUUAAGAUUUAUCCUAGAGUUUAAGAUUUAUCCUAGGGUUUAGGGUUUACCUAAGAGUUUAGGGUUUA |