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BaseInfo

ncRNA ID novel_bna_miR118
Species Brassica napus
Class miRNA
Genome position ChrA10:20585385-20585595 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR527230
Length 23
Mature sequence(if miRNA) 189 - UUUACCUAAGAGUUUAGGGUUUA - 211
Stem-loop(if miRNA) --          C     A               U         A         -A     AACACUAAAC              CCC       -      C     C - U
  AACUCUAAAC CUUGG UAAACUCUAAACCCU GGAUAAAUC UAAACUCUA  AUAAA          UCUUAAACUCUAAA   UAAAAUC CUAAAC CUAAA C C U
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  UUGGGAUUUG GAAUC AUUUGGGAUUUGGGA CCUAUUUAG AUUUGAGAU  UAUUU          AGAAUUUGAGAUUU   GUUUUAG GAUUUG GAUUU G G G
AU          A     C               U         A         CC     ----------              --A       U      U     U U A
Stem-loop sequence AACUCUAAACCCUUGGAUAAACUCUAAACCCUUGGAUAAAUCAUAAACUCUAAAUAAAAACACUAAACUCUUAAACUCUAAACCCUAAAAUCCUAAACCCUAAACCCUUGAGUGUUUUAGUGUUUAGUGAUUUUGAUUUAGAGUUUAAGAUUUAUCCUAGAGUUUAAGAUUUAUCCUAGGGUUUAGGGUUUACCUAAGAGUUUAGGGUUUA