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BaseInfo

ncRNA ID novel_bna_miR109
Species Brassica napus
Class miRNA
Genome position ChrC6:3419762-3419918 [+]
Reference genome Brassica_napus_assembly_v1.0
Source SRR1363495
Length 21
Mature sequence(if miRNA) 1 - ACUUAUAAUUAAGUCGUCUGU - 21
Stem-loop(if miRNA) --                    U                 A             A             A      AUA
  ACUUAUAAUUAAGUCGUCUG AAAGUCUUCCAGCUGGA GACUUAGUAGAAG CUUAUAAUUAAGU GUCUGG   G
  |||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||| ||||||   U
  UGAAUAUUAAUUCAGCAGAC UUUCAGAAGGUCGACCU CUGAAUCAUCUUC GAAUAUUAAUUCA CAGACC   C
UC                    C                 A             G             G      CUU
Stem-loop sequence ACUUAUAAUUAAGUCGUCUGUAAAGUCUUCCAGCUGGAAGACUUAGUAGAAGACUUAUAAUUAAGUAGUCUGGAUAGUCUUCCCAGACGACUUAAUUAUAAGGCUUCUACUAAGUCAUCCAGCUGGAAGACUUUCCAGACGACUUAAUUAUAAGUCU